Protein–RNA interactions for Protein: Q9BV40

VAMP8, Vesicle-associated membrane protein 8, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP8Q9BV40 AC055733.4-201ENST00000638462 1354 ntBASIC13.98□□□□□ -0.17
VAMP8Q9BV40 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
VAMP8Q9BV40 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VAMP8Q9BV40 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
VAMP8Q9BV40 USP39-202ENST00000409025 1946 ntTSL 5 BASIC13.98□□□□□ -0.17
VAMP8Q9BV40 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VAMP8Q9BV40 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VAMP8Q9BV40 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VAMP8Q9BV40 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VAMP8Q9BV40 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
VAMP8Q9BV40 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC13.98□□□□□ -0.17
VAMP8Q9BV40 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
VAMP8Q9BV40 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VAMP8Q9BV40 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
VAMP8Q9BV40 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
VAMP8Q9BV40 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VAMP8Q9BV40 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC13.98□□□□□ -0.17
VAMP8Q9BV40 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VAMP8Q9BV40 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
VAMP8Q9BV40 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VAMP8Q9BV40 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
VAMP8Q9BV40 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VAMP8Q9BV40 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC13.98□□□□□ -0.17
VAMP8Q9BV40 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VAMP8Q9BV40 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
VAMP8Q9BV40 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
VAMP8Q9BV40 AL365209.1-201ENST00000624418 6473 ntBASIC13.98□□□□□ -0.17
VAMP8Q9BV40 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VAMP8Q9BV40 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
VAMP8Q9BV40 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC13.98□□□□□ -0.17
VAMP8Q9BV40 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VAMP8Q9BV40 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
VAMP8Q9BV40 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VAMP8Q9BV40 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
VAMP8Q9BV40 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC13.97□□□□□ -0.17
VAMP8Q9BV40 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VAMP8Q9BV40 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
VAMP8Q9BV40 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC13.97□□□□□ -0.17
VAMP8Q9BV40 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
VAMP8Q9BV40 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
VAMP8Q9BV40 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
VAMP8Q9BV40 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
VAMP8Q9BV40 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
VAMP8Q9BV40 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VAMP8Q9BV40 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VAMP8Q9BV40 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC13.97□□□□□ -0.17
VAMP8Q9BV40 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VAMP8Q9BV40 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.97□□□□□ -0.17
VAMP8Q9BV40 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
VAMP8Q9BV40 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VAMP8Q9BV40 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VAMP8Q9BV40 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VAMP8Q9BV40 NKILA-201ENST00000613231 537 ntTSL 4 BASIC13.97□□□□□ -0.17
VAMP8Q9BV40 AC087239.1-201ENST00000622671 572 ntBASIC13.97□□□□□ -0.17
VAMP8Q9BV40 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VAMP8Q9BV40 AC108860.2-201ENST00000562760 2183 ntBASIC13.97□□□□□ -0.17
VAMP8Q9BV40 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
VAMP8Q9BV40 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VAMP8Q9BV40 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VAMP8Q9BV40 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VAMP8Q9BV40 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC13.97□□□□□ -0.17
VAMP8Q9BV40 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VAMP8Q9BV40 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VAMP8Q9BV40 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VAMP8Q9BV40 AL162741.1-201ENST00000565563 1558 ntBASIC13.96□□□□□ -0.17
VAMP8Q9BV40 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VAMP8Q9BV40 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VAMP8Q9BV40 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
VAMP8Q9BV40 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VAMP8Q9BV40 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VAMP8Q9BV40 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
VAMP8Q9BV40 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VAMP8Q9BV40 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VAMP8Q9BV40 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VAMP8Q9BV40 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
VAMP8Q9BV40 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC13.96□□□□□ -0.17
VAMP8Q9BV40 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC13.96□□□□□ -0.17
VAMP8Q9BV40 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
VAMP8Q9BV40 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VAMP8Q9BV40 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
VAMP8Q9BV40 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
VAMP8Q9BV40 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
VAMP8Q9BV40 BOC-212ENST00000485230 2173 ntTSL 2 BASIC13.96□□□□□ -0.18
VAMP8Q9BV40 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.18
VAMP8Q9BV40 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
VAMP8Q9BV40 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC13.96□□□□□ -0.18
VAMP8Q9BV40 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC13.96□□□□□ -0.18
VAMP8Q9BV40 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
VAMP8Q9BV40 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC13.96□□□□□ -0.18
VAMP8Q9BV40 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC13.96□□□□□ -0.18
VAMP8Q9BV40 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
VAMP8Q9BV40 FLJ38576-201ENST00000623820 2459 ntBASIC13.96□□□□□ -0.18
VAMP8Q9BV40 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
VAMP8Q9BV40 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC13.95□□□□□ -0.18
VAMP8Q9BV40 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
VAMP8Q9BV40 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VAMP8Q9BV40 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VAMP8Q9BV40 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC13.95□□□□□ -0.18
VAMP8Q9BV40 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
VAMP8Q9BV40 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms