Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NDNQ99608 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NDNQ99608 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NDNQ99608 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.07■□□□□ 0.64
NDNQ99608 KRASP1-201ENST00000407852 552 ntBASIC19.07■□□□□ 0.64
NDNQ99608 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
NDNQ99608 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.07■□□□□ 0.64
NDNQ99608 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.07■□□□□ 0.64
NDNQ99608 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
NDNQ99608 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NDNQ99608 C1QL1P1-201ENST00000568105 661 ntBASIC19.07■□□□□ 0.64
NDNQ99608 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.07■□□□□ 0.64
NDNQ99608 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.07■□□□□ 0.64
NDNQ99608 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.07■□□□□ 0.64
NDNQ99608 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NDNQ99608 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
NDNQ99608 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.07■□□□□ 0.64
NDNQ99608 AC020763.4-201ENST00000623414 4170 ntBASIC19.07■□□□□ 0.64
NDNQ99608 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NDNQ99608 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.07■□□□□ 0.64
NDNQ99608 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NDNQ99608 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.07■□□□□ 0.64
NDNQ99608 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NDNQ99608 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NDNQ99608 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NDNQ99608 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.06■□□□□ 0.64
NDNQ99608 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NDNQ99608 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.06■□□□□ 0.64
NDNQ99608 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
NDNQ99608 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
NDNQ99608 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.06■□□□□ 0.64
NDNQ99608 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NDNQ99608 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
NDNQ99608 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NDNQ99608 CROCCP3-202ENST00000420820 1947 ntBASIC19.06■□□□□ 0.64
NDNQ99608 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
NDNQ99608 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NDNQ99608 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NDNQ99608 AC239809.2-201ENST00000415381 517 ntBASIC19.06■□□□□ 0.64
NDNQ99608 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.06■□□□□ 0.64
NDNQ99608 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NDNQ99608 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
NDNQ99608 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NDNQ99608 AC004264.1-201ENST00000608354 794 ntBASIC19.06■□□□□ 0.64
NDNQ99608 HLA-A-209ENST00000638375 975 ntBASIC19.06■□□□□ 0.64
NDNQ99608 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NDNQ99608 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NDNQ99608 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NDNQ99608 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
NDNQ99608 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
NDNQ99608 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NDNQ99608 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
NDNQ99608 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.06■□□□□ 0.64
NDNQ99608 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NDNQ99608 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
NDNQ99608 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
NDNQ99608 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NDNQ99608 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NDNQ99608 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NDNQ99608 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NDNQ99608 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.05■□□□□ 0.64
NDNQ99608 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NDNQ99608 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
NDNQ99608 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NDNQ99608 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NDNQ99608 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NDNQ99608 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NDNQ99608 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
NDNQ99608 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.05■□□□□ 0.64
NDNQ99608 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
NDNQ99608 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NDNQ99608 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NDNQ99608 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NDNQ99608 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NDNQ99608 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.05■□□□□ 0.64
NDNQ99608 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NDNQ99608 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NDNQ99608 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NDNQ99608 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
NDNQ99608 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.05■□□□□ 0.64
NDNQ99608 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
NDNQ99608 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.05■□□□□ 0.64
NDNQ99608 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
NDNQ99608 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NDNQ99608 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NDNQ99608 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
NDNQ99608 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NDNQ99608 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.04■□□□□ 0.64
NDNQ99608 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NDNQ99608 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NDNQ99608 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
NDNQ99608 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NDNQ99608 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NDNQ99608 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.04■□□□□ 0.64
NDNQ99608 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.04■□□□□ 0.64
NDNQ99608 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NDNQ99608 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
NDNQ99608 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.04■□□□□ 0.64
NDNQ99608 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.04■□□□□ 0.64
NDNQ99608 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms