Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.96■□□□□ 0.95
RPGRIP1Q96KN7 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.96■□□□□ 0.95
RPGRIP1Q96KN7 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPGRIP1Q96KN7 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.96■□□□□ 0.95
RPGRIP1Q96KN7 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20.96■□□□□ 0.95
RPGRIP1Q96KN7 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPGRIP1Q96KN7 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
RPGRIP1Q96KN7 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
RPGRIP1Q96KN7 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPGRIP1Q96KN7 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPGRIP1Q96KN7 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPGRIP1Q96KN7 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
RPGRIP1Q96KN7 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.96■□□□□ 0.95
RPGRIP1Q96KN7 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPGRIP1Q96KN7 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPGRIP1Q96KN7 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
RPGRIP1Q96KN7 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
RPGRIP1Q96KN7 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPGRIP1Q96KN7 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPGRIP1Q96KN7 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPGRIP1Q96KN7 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RPGRIP1Q96KN7 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RPGRIP1Q96KN7 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPGRIP1Q96KN7 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.95■□□□□ 0.94
RPGRIP1Q96KN7 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.95■□□□□ 0.94
RPGRIP1Q96KN7 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
RPGRIP1Q96KN7 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPGRIP1Q96KN7 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.95■□□□□ 0.94
RPGRIP1Q96KN7 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPGRIP1Q96KN7 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPGRIP1Q96KN7 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPGRIP1Q96KN7 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.95■□□□□ 0.94
RPGRIP1Q96KN7 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.95■□□□□ 0.94
RPGRIP1Q96KN7 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
RPGRIP1Q96KN7 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.95■□□□□ 0.94
RPGRIP1Q96KN7 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RPGRIP1Q96KN7 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
RPGRIP1Q96KN7 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RPGRIP1Q96KN7 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RPGRIP1Q96KN7 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
RPGRIP1Q96KN7 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
RPGRIP1Q96KN7 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RPGRIP1Q96KN7 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RPGRIP1Q96KN7 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.94■□□□□ 0.94
RPGRIP1Q96KN7 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.94■□□□□ 0.94
RPGRIP1Q96KN7 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPGRIP1Q96KN7 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPGRIP1Q96KN7 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RPGRIP1Q96KN7 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPGRIP1Q96KN7 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.94■□□□□ 0.94
RPGRIP1Q96KN7 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.94■□□□□ 0.94
RPGRIP1Q96KN7 LIN28AP1-201ENST00000429574 405 ntBASIC20.94■□□□□ 0.94
RPGRIP1Q96KN7 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.94■□□□□ 0.94
RPGRIP1Q96KN7 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.94■□□□□ 0.94
RPGRIP1Q96KN7 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC20.94■□□□□ 0.94
RPGRIP1Q96KN7 AL121906.2-201ENST00000621597 723 ntBASIC20.94■□□□□ 0.94
RPGRIP1Q96KN7 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
RPGRIP1Q96KN7 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.94■□□□□ 0.94
RPGRIP1Q96KN7 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPGRIP1Q96KN7 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
RPGRIP1Q96KN7 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.94■□□□□ 0.94
RPGRIP1Q96KN7 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
RPGRIP1Q96KN7 AC026471.1-201ENST00000564629 3026 ntBASIC20.94■□□□□ 0.94
RPGRIP1Q96KN7 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RPGRIP1Q96KN7 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.94■□□□□ 0.94
RPGRIP1Q96KN7 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPGRIP1Q96KN7 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPGRIP1Q96KN7 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.93■□□□□ 0.94
RPGRIP1Q96KN7 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPGRIP1Q96KN7 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.93■□□□□ 0.94
RPGRIP1Q96KN7 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RPGRIP1Q96KN7 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPGRIP1Q96KN7 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPGRIP1Q96KN7 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPGRIP1Q96KN7 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPGRIP1Q96KN7 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.93■□□□□ 0.94
RPGRIP1Q96KN7 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RPGRIP1Q96KN7 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.93■□□□□ 0.94
RPGRIP1Q96KN7 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.93■□□□□ 0.94
RPGRIP1Q96KN7 AC010203.1-204ENST00000548782 407 ntBASIC20.93■□□□□ 0.94
RPGRIP1Q96KN7 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.93■□□□□ 0.94
RPGRIP1Q96KN7 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPGRIP1Q96KN7 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPGRIP1Q96KN7 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.93■□□□□ 0.94
RPGRIP1Q96KN7 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPGRIP1Q96KN7 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPGRIP1Q96KN7 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
RPGRIP1Q96KN7 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPGRIP1Q96KN7 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
RPGRIP1Q96KN7 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPGRIP1Q96KN7 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPGRIP1Q96KN7 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.92■□□□□ 0.94
RPGRIP1Q96KN7 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPGRIP1Q96KN7 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPGRIP1Q96KN7 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPGRIP1Q96KN7 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
RPGRIP1Q96KN7 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPGRIP1Q96KN7 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.92■□□□□ 0.94
RPGRIP1Q96KN7 AC005082.1-201ENST00000413042 2259 ntBASIC20.92■□□□□ 0.94
RPGRIP1Q96KN7 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms