Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDLIM5Q96HC4 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDLIM5Q96HC4 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PDLIM5Q96HC4 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDLIM5Q96HC4 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.61■□□□□ 0.57
PDLIM5Q96HC4 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.61■□□□□ 0.57
PDLIM5Q96HC4 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDLIM5Q96HC4 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PDLIM5Q96HC4 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDLIM5Q96HC4 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDLIM5Q96HC4 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDLIM5Q96HC4 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
PDLIM5Q96HC4 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PDLIM5Q96HC4 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PDLIM5Q96HC4 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PDLIM5Q96HC4 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDLIM5Q96HC4 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
PDLIM5Q96HC4 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.6■□□□□ 0.57
PDLIM5Q96HC4 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDLIM5Q96HC4 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDLIM5Q96HC4 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDLIM5Q96HC4 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.6■□□□□ 0.57
PDLIM5Q96HC4 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
PDLIM5Q96HC4 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDLIM5Q96HC4 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDLIM5Q96HC4 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PDLIM5Q96HC4 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PDLIM5Q96HC4 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PDLIM5Q96HC4 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
PDLIM5Q96HC4 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.6■□□□□ 0.57
PDLIM5Q96HC4 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.6■□□□□ 0.57
PDLIM5Q96HC4 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PDLIM5Q96HC4 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDLIM5Q96HC4 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PDLIM5Q96HC4 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.6■□□□□ 0.57
PDLIM5Q96HC4 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PDLIM5Q96HC4 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDLIM5Q96HC4 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDLIM5Q96HC4 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PDLIM5Q96HC4 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.59■□□□□ 0.57
PDLIM5Q96HC4 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDLIM5Q96HC4 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.59■□□□□ 0.57
PDLIM5Q96HC4 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDLIM5Q96HC4 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDLIM5Q96HC4 KRT8P3-201ENST00000519669 1449 ntBASIC18.59■□□□□ 0.57
PDLIM5Q96HC4 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDLIM5Q96HC4 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PDLIM5Q96HC4 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.59■□□□□ 0.57
PDLIM5Q96HC4 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDLIM5Q96HC4 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
PDLIM5Q96HC4 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PDLIM5Q96HC4 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.59■□□□□ 0.57
PDLIM5Q96HC4 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PDLIM5Q96HC4 UBE2SP1-201ENST00000450587 669 ntBASIC18.59■□□□□ 0.57
PDLIM5Q96HC4 AC008040.2-201ENST00000461049 708 ntBASIC18.59■□□□□ 0.57
PDLIM5Q96HC4 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.59■□□□□ 0.57
PDLIM5Q96HC4 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.59■□□□□ 0.57
PDLIM5Q96HC4 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.59■□□□□ 0.57
PDLIM5Q96HC4 AC142381.4-202ENST00000563973 229 ntBASIC18.59■□□□□ 0.57
PDLIM5Q96HC4 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.59■□□□□ 0.57
PDLIM5Q96HC4 AC011298.2-201ENST00000617989 482 ntBASIC18.59■□□□□ 0.57
PDLIM5Q96HC4 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PDLIM5Q96HC4 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PDLIM5Q96HC4 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.59■□□□□ 0.57
PDLIM5Q96HC4 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
PDLIM5Q96HC4 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDLIM5Q96HC4 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDLIM5Q96HC4 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.59■□□□□ 0.57
PDLIM5Q96HC4 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDLIM5Q96HC4 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDLIM5Q96HC4 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PDLIM5Q96HC4 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDLIM5Q96HC4 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDLIM5Q96HC4 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.59■□□□□ 0.57
PDLIM5Q96HC4 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
PDLIM5Q96HC4 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PDLIM5Q96HC4 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
PDLIM5Q96HC4 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PDLIM5Q96HC4 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PDLIM5Q96HC4 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PDLIM5Q96HC4 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.58■□□□□ 0.57
PDLIM5Q96HC4 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PDLIM5Q96HC4 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.58■□□□□ 0.57
PDLIM5Q96HC4 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.58■□□□□ 0.57
PDLIM5Q96HC4 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDLIM5Q96HC4 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDLIM5Q96HC4 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDLIM5Q96HC4 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDLIM5Q96HC4 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.58■□□□□ 0.56
PDLIM5Q96HC4 GCSHP5-201ENST00000443090 522 ntBASIC18.58■□□□□ 0.56
PDLIM5Q96HC4 AC011506.1-201ENST00000474329 610 ntBASIC18.58■□□□□ 0.56
PDLIM5Q96HC4 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.58■□□□□ 0.56
PDLIM5Q96HC4 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.58■□□□□ 0.56
PDLIM5Q96HC4 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.58■□□□□ 0.56
PDLIM5Q96HC4 MIR6786-201ENST00000616843 113 ntBASIC18.58■□□□□ 0.56
PDLIM5Q96HC4 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDLIM5Q96HC4 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PDLIM5Q96HC4 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDLIM5Q96HC4 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDLIM5Q96HC4 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms