Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RFT1Q96AA3 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFT1Q96AA3 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
RFT1Q96AA3 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RFT1Q96AA3 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFT1Q96AA3 Z98044.1-201ENST00000632503 1764 ntBASIC16.85■□□□□ 0.29
RFT1Q96AA3 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFT1Q96AA3 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RFT1Q96AA3 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFT1Q96AA3 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC16.85■□□□□ 0.29
RFT1Q96AA3 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFT1Q96AA3 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFT1Q96AA3 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFT1Q96AA3 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFT1Q96AA3 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC16.85■□□□□ 0.29
RFT1Q96AA3 SERP1-205ENST00000487153 657 ntTSL 4 BASIC16.85■□□□□ 0.29
RFT1Q96AA3 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC16.85■□□□□ 0.29
RFT1Q96AA3 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC16.85■□□□□ 0.29
RFT1Q96AA3 AL050303.2-201ENST00000619798 666 ntBASIC16.85■□□□□ 0.29
RFT1Q96AA3 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFT1Q96AA3 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFT1Q96AA3 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFT1Q96AA3 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFT1Q96AA3 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFT1Q96AA3 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFT1Q96AA3 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.85■□□□□ 0.29
RFT1Q96AA3 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFT1Q96AA3 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.85■□□□□ 0.29
RFT1Q96AA3 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.84■□□□□ 0.29
RFT1Q96AA3 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFT1Q96AA3 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RFT1Q96AA3 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
RFT1Q96AA3 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFT1Q96AA3 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RFT1Q96AA3 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.84■□□□□ 0.29
RFT1Q96AA3 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RFT1Q96AA3 MIR663A-201ENST00000385250 93 ntBASIC16.84■□□□□ 0.29
RFT1Q96AA3 GPX1P1-201ENST00000388829 606 ntBASIC16.84■□□□□ 0.29
RFT1Q96AA3 BX276092.2-201ENST00000417668 665 ntBASIC16.84■□□□□ 0.29
RFT1Q96AA3 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC16.84■□□□□ 0.29
RFT1Q96AA3 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC16.84■□□□□ 0.29
RFT1Q96AA3 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC16.84■□□□□ 0.29
RFT1Q96AA3 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
RFT1Q96AA3 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC16.84■□□□□ 0.29
RFT1Q96AA3 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFT1Q96AA3 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFT1Q96AA3 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC16.84■□□□□ 0.29
RFT1Q96AA3 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFT1Q96AA3 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RFT1Q96AA3 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RFT1Q96AA3 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RFT1Q96AA3 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RFT1Q96AA3 OR6D1P-202ENST00000641007 5290 ntBASIC16.84■□□□□ 0.29
RFT1Q96AA3 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFT1Q96AA3 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFT1Q96AA3 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFT1Q96AA3 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RFT1Q96AA3 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
RFT1Q96AA3 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFT1Q96AA3 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RFT1Q96AA3 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RFT1Q96AA3 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFT1Q96AA3 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RFT1Q96AA3 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
RFT1Q96AA3 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RFT1Q96AA3 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.83■□□□□ 0.28
RFT1Q96AA3 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RFT1Q96AA3 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RFT1Q96AA3 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RFT1Q96AA3 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.83■□□□□ 0.28
RFT1Q96AA3 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC16.83■□□□□ 0.28
RFT1Q96AA3 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RFT1Q96AA3 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RFT1Q96AA3 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RFT1Q96AA3 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RFT1Q96AA3 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
RFT1Q96AA3 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
RFT1Q96AA3 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC16.83■□□□□ 0.28
RFT1Q96AA3 AF201337.1-201ENST00000520239 748 ntBASIC16.83■□□□□ 0.28
RFT1Q96AA3 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RFT1Q96AA3 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC16.83■□□□□ 0.28
RFT1Q96AA3 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.83■□□□□ 0.28
RFT1Q96AA3 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RFT1Q96AA3 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
RFT1Q96AA3 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RFT1Q96AA3 AC018553.1-201ENST00000616682 1458 ntBASIC16.83■□□□□ 0.28
RFT1Q96AA3 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.83■□□□□ 0.28
RFT1Q96AA3 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RFT1Q96AA3 AC093525.10-201ENST00000625130 1569 ntBASIC16.83■□□□□ 0.28
RFT1Q96AA3 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.83■□□□□ 0.28
RFT1Q96AA3 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.83■□□□□ 0.28
RFT1Q96AA3 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16.83■□□□□ 0.28
RFT1Q96AA3 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
RFT1Q96AA3 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
RFT1Q96AA3 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
RFT1Q96AA3 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
RFT1Q96AA3 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RFT1Q96AA3 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFT1Q96AA3 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFT1Q96AA3 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms