Protein–RNA interactions for Protein: Q969H4

CNKSR1, Connector enhancer of kinase suppressor of ras 1, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1Q969H4 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
CNKSR1Q969H4 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
CNKSR1Q969H4 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
CNKSR1Q969H4 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC23.33■■□□□ 1.32
CNKSR1Q969H4 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CNKSR1Q969H4 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CNKSR1Q969H4 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
CNKSR1Q969H4 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC23.32■■□□□ 1.32
CNKSR1Q969H4 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CNKSR1Q969H4 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CNKSR1Q969H4 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC23.32■■□□□ 1.32
CNKSR1Q969H4 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC23.32■■□□□ 1.32
CNKSR1Q969H4 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CNKSR1Q969H4 BAALC-202ENST00000306391 243 ntTSL 5 BASIC23.32■■□□□ 1.32
CNKSR1Q969H4 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CNKSR1Q969H4 BAALC-204ENST00000330955 222 ntTSL 5 BASIC23.32■■□□□ 1.32
CNKSR1Q969H4 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
CNKSR1Q969H4 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC23.32■■□□□ 1.32
CNKSR1Q969H4 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC23.32■■□□□ 1.32
CNKSR1Q969H4 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC23.32■■□□□ 1.32
CNKSR1Q969H4 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CNKSR1Q969H4 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC23.32■■□□□ 1.32
CNKSR1Q969H4 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
CNKSR1Q969H4 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CNKSR1Q969H4 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC23.32■■□□□ 1.32
CNKSR1Q969H4 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CNKSR1Q969H4 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CNKSR1Q969H4 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
CNKSR1Q969H4 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CNKSR1Q969H4 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CNKSR1Q969H4 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CNKSR1Q969H4 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CNKSR1Q969H4 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CNKSR1Q969H4 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC23.31■■□□□ 1.32
CNKSR1Q969H4 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC23.31■■□□□ 1.32
CNKSR1Q969H4 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CNKSR1Q969H4 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC23.31■■□□□ 1.32
CNKSR1Q969H4 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
CNKSR1Q969H4 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CNKSR1Q969H4 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC23.31■■□□□ 1.32
CNKSR1Q969H4 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC23.31■■□□□ 1.32
CNKSR1Q969H4 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC23.31■■□□□ 1.32
CNKSR1Q969H4 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC23.31■■□□□ 1.32
CNKSR1Q969H4 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC23.31■■□□□ 1.32
CNKSR1Q969H4 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CNKSR1Q969H4 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CNKSR1Q969H4 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
CNKSR1Q969H4 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC23.31■■□□□ 1.32
CNKSR1Q969H4 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC23.3■■□□□ 1.32
CNKSR1Q969H4 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CNKSR1Q969H4 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CNKSR1Q969H4 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CNKSR1Q969H4 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CNKSR1Q969H4 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
CNKSR1Q969H4 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
CNKSR1Q969H4 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CNKSR1Q969H4 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CNKSR1Q969H4 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
CNKSR1Q969H4 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC23.3■■□□□ 1.32
CNKSR1Q969H4 AC104819.1-201ENST00000504587 486 ntBASIC23.3■■□□□ 1.32
CNKSR1Q969H4 CALM3-211ENST00000598871 561 ntTSL 4 BASIC23.3■■□□□ 1.32
CNKSR1Q969H4 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CNKSR1Q969H4 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CNKSR1Q969H4 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CNKSR1Q969H4 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CNKSR1Q969H4 KRT8P3-201ENST00000519669 1449 ntBASIC23.3■■□□□ 1.32
CNKSR1Q969H4 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC23.3■■□□□ 1.32
CNKSR1Q969H4 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC23.3■■□□□ 1.32
CNKSR1Q969H4 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC23.3■■□□□ 1.32
CNKSR1Q969H4 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
CNKSR1Q969H4 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
CNKSR1Q969H4 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC23.3■■□□□ 1.32
CNKSR1Q969H4 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC23.29■■□□□ 1.32
CNKSR1Q969H4 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CNKSR1Q969H4 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
CNKSR1Q969H4 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC23.29■■□□□ 1.32
CNKSR1Q969H4 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CNKSR1Q969H4 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CNKSR1Q969H4 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CNKSR1Q969H4 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
CNKSR1Q969H4 AP000593.1-201ENST00000393668 712 ntBASIC23.29■■□□□ 1.32
CNKSR1Q969H4 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC23.29■■□□□ 1.32
CNKSR1Q969H4 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC23.29■■□□□ 1.32
CNKSR1Q969H4 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
CNKSR1Q969H4 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
CNKSR1Q969H4 TPM1-218ENST00000559281 851 ntTSL 5 BASIC23.29■■□□□ 1.32
CNKSR1Q969H4 AC090616.6-201ENST00000582640 721 ntBASIC23.29■■□□□ 1.32
CNKSR1Q969H4 AL121912.1-201ENST00000603683 238 ntBASIC23.29■■□□□ 1.32
CNKSR1Q969H4 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
CNKSR1Q969H4 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC23.29■■□□□ 1.32
CNKSR1Q969H4 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CNKSR1Q969H4 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC23.29■■□□□ 1.32
CNKSR1Q969H4 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CNKSR1Q969H4 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CNKSR1Q969H4 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CNKSR1Q969H4 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CNKSR1Q969H4 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CNKSR1Q969H4 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC23.28■■□□□ 1.32
CNKSR1Q969H4 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC23.28■■□□□ 1.32
CNKSR1Q969H4 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms