Protein–RNA interactions for Protein: Q93009

USP7, Ubiquitin carboxyl-terminal hydrolase 7, humanhuman

Predictions only

Length 1,102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP7Q93009 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP7Q93009 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP7Q93009 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP7Q93009 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.79■□□□□ 0.6
USP7Q93009 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP7Q93009 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP7Q93009 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
USP7Q93009 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
USP7Q93009 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
USP7Q93009 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP7Q93009 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.78■□□□□ 0.6
USP7Q93009 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
USP7Q93009 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
USP7Q93009 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
USP7Q93009 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.78■□□□□ 0.6
USP7Q93009 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP7Q93009 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP7Q93009 TERF1P1-201ENST00000311003 1181 ntBASIC18.78■□□□□ 0.6
USP7Q93009 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP7Q93009 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
USP7Q93009 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.78■□□□□ 0.6
USP7Q93009 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.78■□□□□ 0.6
USP7Q93009 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.78■□□□□ 0.6
USP7Q93009 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP7Q93009 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP7Q93009 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP7Q93009 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP7Q93009 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.78■□□□□ 0.6
USP7Q93009 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP7Q93009 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP7Q93009 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
USP7Q93009 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP7Q93009 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
USP7Q93009 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
USP7Q93009 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP7Q93009 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP7Q93009 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.77■□□□□ 0.6
USP7Q93009 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP7Q93009 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
USP7Q93009 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.77■□□□□ 0.6
USP7Q93009 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP7Q93009 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.77■□□□□ 0.6
USP7Q93009 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.77■□□□□ 0.6
USP7Q93009 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP7Q93009 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP7Q93009 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP7Q93009 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.77■□□□□ 0.6
USP7Q93009 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.77■□□□□ 0.6
USP7Q93009 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.77■□□□□ 0.6
USP7Q93009 SLC25A3P1-201ENST00000443844 931 ntBASIC18.77■□□□□ 0.6
USP7Q93009 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.77■□□□□ 0.6
USP7Q93009 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.77■□□□□ 0.6
USP7Q93009 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP7Q93009 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
USP7Q93009 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.77■□□□□ 0.6
USP7Q93009 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP7Q93009 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
USP7Q93009 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
USP7Q93009 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
USP7Q93009 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP7Q93009 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
USP7Q93009 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.76■□□□□ 0.59
USP7Q93009 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP7Q93009 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP7Q93009 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP7Q93009 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP7Q93009 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
USP7Q93009 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP7Q93009 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
USP7Q93009 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
USP7Q93009 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP7Q93009 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
USP7Q93009 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
USP7Q93009 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP7Q93009 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.76■□□□□ 0.59
USP7Q93009 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.76■□□□□ 0.59
USP7Q93009 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
USP7Q93009 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.76■□□□□ 0.59
USP7Q93009 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.76■□□□□ 0.59
USP7Q93009 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.76■□□□□ 0.59
USP7Q93009 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.76■□□□□ 0.59
USP7Q93009 C1QL1P1-201ENST00000568105 661 ntBASIC18.76■□□□□ 0.59
USP7Q93009 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.76■□□□□ 0.59
USP7Q93009 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
USP7Q93009 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
USP7Q93009 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
USP7Q93009 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP7Q93009 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.76■□□□□ 0.59
USP7Q93009 FSCN1P1-201ENST00000568912 1481 ntBASIC18.76■□□□□ 0.59
USP7Q93009 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP7Q93009 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP7Q93009 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP7Q93009 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
USP7Q93009 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.76■□□□□ 0.59
USP7Q93009 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
USP7Q93009 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.76■□□□□ 0.59
USP7Q93009 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
USP7Q93009 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
USP7Q93009 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP7Q93009 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms