Protein–RNA interactions for Protein: Q92772

CDKL2, Cyclin-dependent kinase-like 2, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL2Q92772 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDKL2Q92772 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.23■□□□□ 0.67
CDKL2Q92772 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDKL2Q92772 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDKL2Q92772 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.23■□□□□ 0.67
CDKL2Q92772 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDKL2Q92772 AL512353.2-201ENST00000448759 1962 ntBASIC19.23■□□□□ 0.67
CDKL2Q92772 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.22■□□□□ 0.67
CDKL2Q92772 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.22■□□□□ 0.67
CDKL2Q92772 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDKL2Q92772 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDKL2Q92772 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.22■□□□□ 0.67
CDKL2Q92772 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDKL2Q92772 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.22■□□□□ 0.67
CDKL2Q92772 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDKL2Q92772 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDKL2Q92772 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.22■□□□□ 0.67
CDKL2Q92772 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDKL2Q92772 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDKL2Q92772 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.22■□□□□ 0.67
CDKL2Q92772 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDKL2Q92772 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.22■□□□□ 0.67
CDKL2Q92772 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.22■□□□□ 0.67
CDKL2Q92772 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.22■□□□□ 0.67
CDKL2Q92772 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.22■□□□□ 0.67
CDKL2Q92772 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.22■□□□□ 0.67
CDKL2Q92772 AC083880.1-201ENST00000608266 535 ntBASIC19.22■□□□□ 0.67
CDKL2Q92772 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDKL2Q92772 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDKL2Q92772 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.22■□□□□ 0.67
CDKL2Q92772 WIZP1-201ENST00000531444 2299 ntBASIC19.22■□□□□ 0.67
CDKL2Q92772 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDKL2Q92772 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CDKL2Q92772 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDKL2Q92772 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.22■□□□□ 0.67
CDKL2Q92772 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDKL2Q92772 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDKL2Q92772 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDKL2Q92772 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDKL2Q92772 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDKL2Q92772 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDKL2Q92772 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.21■□□□□ 0.67
CDKL2Q92772 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDKL2Q92772 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDKL2Q92772 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CDKL2Q92772 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CDKL2Q92772 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDKL2Q92772 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDKL2Q92772 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDKL2Q92772 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDKL2Q92772 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.21■□□□□ 0.67
CDKL2Q92772 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDKL2Q92772 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CDKL2Q92772 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDKL2Q92772 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDKL2Q92772 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.21■□□□□ 0.67
CDKL2Q92772 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.21■□□□□ 0.67
CDKL2Q92772 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDKL2Q92772 PRKY-204ENST00000533551 1019 ntBASIC19.21■□□□□ 0.67
CDKL2Q92772 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.21■□□□□ 0.67
CDKL2Q92772 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.21■□□□□ 0.67
CDKL2Q92772 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.21■□□□□ 0.67
CDKL2Q92772 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CDKL2Q92772 AC133041.1-202ENST00000642053 222 ntBASIC19.21■□□□□ 0.67
CDKL2Q92772 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
CDKL2Q92772 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.21■□□□□ 0.67
CDKL2Q92772 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDKL2Q92772 AC079598.2-202ENST00000546624 1451 ntBASIC19.21■□□□□ 0.67
CDKL2Q92772 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CDKL2Q92772 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CDKL2Q92772 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.21■□□□□ 0.67
CDKL2Q92772 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.21■□□□□ 0.67
CDKL2Q92772 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.21■□□□□ 0.67
CDKL2Q92772 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.21■□□□□ 0.66
CDKL2Q92772 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CDKL2Q92772 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CDKL2Q92772 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.2■□□□□ 0.66
CDKL2Q92772 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDKL2Q92772 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
CDKL2Q92772 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDKL2Q92772 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDKL2Q92772 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDKL2Q92772 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDKL2Q92772 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDKL2Q92772 TSPY21P-201ENST00000433481 731 ntBASIC19.2■□□□□ 0.66
CDKL2Q92772 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDKL2Q92772 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.2■□□□□ 0.66
CDKL2Q92772 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CDKL2Q92772 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDKL2Q92772 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.2■□□□□ 0.66
CDKL2Q92772 AC090164.3-201ENST00000610780 2143 ntBASIC19.2■□□□□ 0.66
CDKL2Q92772 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.2■□□□□ 0.66
CDKL2Q92772 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CDKL2Q92772 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDKL2Q92772 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.2■□□□□ 0.66
CDKL2Q92772 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
CDKL2Q92772 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.2■□□□□ 0.66
CDKL2Q92772 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDKL2Q92772 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CDKL2Q92772 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms