Protein–RNA interactions for Protein: Q8WWL7

CCNB3, G2/mitotic-specific cyclin-B3, humanhuman

Predictions only

Length 1,395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3Q8WWL7 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
CCNB3Q8WWL7 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
CCNB3Q8WWL7 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
CCNB3Q8WWL7 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC29.33■■■□□ 2.29
CCNB3Q8WWL7 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
CCNB3Q8WWL7 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
CCNB3Q8WWL7 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
CCNB3Q8WWL7 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
CCNB3Q8WWL7 SPDYE13P-201ENST00000445314 798 ntBASIC29.33■■■□□ 2.29
CCNB3Q8WWL7 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC29.33■■■□□ 2.29
CCNB3Q8WWL7 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC29.33■■■□□ 2.29
CCNB3Q8WWL7 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC29.33■■■□□ 2.29
CCNB3Q8WWL7 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
CCNB3Q8WWL7 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC29.33■■■□□ 2.29
CCNB3Q8WWL7 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
CCNB3Q8WWL7 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC29.33■■■□□ 2.29
CCNB3Q8WWL7 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
CCNB3Q8WWL7 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
CCNB3Q8WWL7 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
CCNB3Q8WWL7 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC29.33■■■□□ 2.29
CCNB3Q8WWL7 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
CCNB3Q8WWL7 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC29.32■■■□□ 2.28
CCNB3Q8WWL7 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
CCNB3Q8WWL7 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
CCNB3Q8WWL7 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC29.32■■■□□ 2.28
CCNB3Q8WWL7 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC29.32■■■□□ 2.28
CCNB3Q8WWL7 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC29.32■■■□□ 2.28
CCNB3Q8WWL7 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC29.32■■■□□ 2.28
CCNB3Q8WWL7 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC29.32■■■□□ 2.28
CCNB3Q8WWL7 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
CCNB3Q8WWL7 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC29.32■■■□□ 2.28
CCNB3Q8WWL7 KRT126P-201ENST00000549467 1181 ntBASIC29.32■■■□□ 2.28
CCNB3Q8WWL7 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC29.32■■■□□ 2.28
CCNB3Q8WWL7 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
CCNB3Q8WWL7 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC29.32■■■□□ 2.28
CCNB3Q8WWL7 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CCNB3Q8WWL7 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CCNB3Q8WWL7 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CCNB3Q8WWL7 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC29.31■■■□□ 2.28
CCNB3Q8WWL7 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC29.31■■■□□ 2.28
CCNB3Q8WWL7 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC29.31■■■□□ 2.28
CCNB3Q8WWL7 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC29.31■■■□□ 2.28
CCNB3Q8WWL7 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC29.31■■■□□ 2.28
CCNB3Q8WWL7 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC29.31■■■□□ 2.28
CCNB3Q8WWL7 AL121894.2-201ENST00000602977 491 ntBASIC29.31■■■□□ 2.28
CCNB3Q8WWL7 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC29.31■■■□□ 2.28
CCNB3Q8WWL7 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CCNB3Q8WWL7 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC29.31■■■□□ 2.28
CCNB3Q8WWL7 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CCNB3Q8WWL7 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC29.31■■■□□ 2.28
CCNB3Q8WWL7 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC29.3■■■□□ 2.28
CCNB3Q8WWL7 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
CCNB3Q8WWL7 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
CCNB3Q8WWL7 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
CCNB3Q8WWL7 FXN-203ENST00000396366 922 ntTSL 2 BASIC29.3■■■□□ 2.28
CCNB3Q8WWL7 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
CCNB3Q8WWL7 HCG4P8-203ENST00000443049 980 ntBASIC29.3■■■□□ 2.28
CCNB3Q8WWL7 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC29.3■■■□□ 2.28
CCNB3Q8WWL7 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
CCNB3Q8WWL7 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC29.3■■■□□ 2.28
CCNB3Q8WWL7 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
CCNB3Q8WWL7 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC29.3■■■□□ 2.28
CCNB3Q8WWL7 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC29.3■■■□□ 2.28
CCNB3Q8WWL7 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC29.3■■■□□ 2.28
CCNB3Q8WWL7 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
CCNB3Q8WWL7 LINC01311-201ENST00000565162 1445 ntBASIC29.3■■■□□ 2.28
CCNB3Q8WWL7 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CCNB3Q8WWL7 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC29.29■■■□□ 2.28
CCNB3Q8WWL7 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
CCNB3Q8WWL7 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
CCNB3Q8WWL7 TSPY21P-201ENST00000433481 731 ntBASIC29.29■■■□□ 2.28
CCNB3Q8WWL7 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
CCNB3Q8WWL7 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC29.29■■■□□ 2.28
CCNB3Q8WWL7 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC29.29■■■□□ 2.28
CCNB3Q8WWL7 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC29.29■■■□□ 2.28
CCNB3Q8WWL7 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CCNB3Q8WWL7 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC29.29■■■□□ 2.28
CCNB3Q8WWL7 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC29.29■■■□□ 2.28
CCNB3Q8WWL7 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CCNB3Q8WWL7 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CCNB3Q8WWL7 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
CCNB3Q8WWL7 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CCNB3Q8WWL7 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CCNB3Q8WWL7 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CCNB3Q8WWL7 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
CCNB3Q8WWL7 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CCNB3Q8WWL7 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
CCNB3Q8WWL7 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CCNB3Q8WWL7 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC29.28■■■□□ 2.28
CCNB3Q8WWL7 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC29.28■■■□□ 2.28
CCNB3Q8WWL7 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
CCNB3Q8WWL7 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CCNB3Q8WWL7 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CCNB3Q8WWL7 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CCNB3Q8WWL7 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC29.28■■■□□ 2.28
CCNB3Q8WWL7 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC29.28■■■□□ 2.28
CCNB3Q8WWL7 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CCNB3Q8WWL7 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC29.28■■■□□ 2.28
CCNB3Q8WWL7 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
CCNB3Q8WWL7 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms