Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CKAP2Q8WWK9 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CKAP2Q8WWK9 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.92■□□□□ 0.62
CKAP2Q8WWK9 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.92■□□□□ 0.62
CKAP2Q8WWK9 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CKAP2Q8WWK9 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.92■□□□□ 0.62
CKAP2Q8WWK9 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CKAP2Q8WWK9 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CKAP2Q8WWK9 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CKAP2Q8WWK9 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CKAP2Q8WWK9 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CKAP2Q8WWK9 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CKAP2Q8WWK9 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
CKAP2Q8WWK9 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
CKAP2Q8WWK9 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CKAP2Q8WWK9 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CKAP2Q8WWK9 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CKAP2Q8WWK9 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CKAP2Q8WWK9 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CKAP2Q8WWK9 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CKAP2Q8WWK9 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CKAP2Q8WWK9 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CKAP2Q8WWK9 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.91■□□□□ 0.62
CKAP2Q8WWK9 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.91■□□□□ 0.62
CKAP2Q8WWK9 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.91■□□□□ 0.62
CKAP2Q8WWK9 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.91■□□□□ 0.62
CKAP2Q8WWK9 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.91■□□□□ 0.62
CKAP2Q8WWK9 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CKAP2Q8WWK9 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.91■□□□□ 0.62
CKAP2Q8WWK9 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CKAP2Q8WWK9 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CKAP2Q8WWK9 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.91■□□□□ 0.62
CKAP2Q8WWK9 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CKAP2Q8WWK9 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CKAP2Q8WWK9 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
CKAP2Q8WWK9 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.91■□□□□ 0.62
CKAP2Q8WWK9 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.91■□□□□ 0.62
CKAP2Q8WWK9 AC068338.2-201ENST00000563278 1430 ntBASIC18.91■□□□□ 0.62
CKAP2Q8WWK9 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.91■□□□□ 0.62
CKAP2Q8WWK9 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
CKAP2Q8WWK9 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CKAP2Q8WWK9 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CKAP2Q8WWK9 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.9■□□□□ 0.62
CKAP2Q8WWK9 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CKAP2Q8WWK9 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CKAP2Q8WWK9 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CKAP2Q8WWK9 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CKAP2Q8WWK9 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CKAP2Q8WWK9 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.9■□□□□ 0.62
CKAP2Q8WWK9 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CKAP2Q8WWK9 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
CKAP2Q8WWK9 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.9■□□□□ 0.62
CKAP2Q8WWK9 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CKAP2Q8WWK9 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CKAP2Q8WWK9 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.9■□□□□ 0.62
CKAP2Q8WWK9 AL589743.5-201ENST00000616611 1050 ntBASIC18.9■□□□□ 0.62
CKAP2Q8WWK9 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.9■□□□□ 0.62
CKAP2Q8WWK9 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CKAP2Q8WWK9 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CKAP2Q8WWK9 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CKAP2Q8WWK9 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
CKAP2Q8WWK9 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.9■□□□□ 0.62
CKAP2Q8WWK9 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CKAP2Q8WWK9 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.9■□□□□ 0.62
CKAP2Q8WWK9 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CKAP2Q8WWK9 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CKAP2Q8WWK9 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CKAP2Q8WWK9 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CKAP2Q8WWK9 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CKAP2Q8WWK9 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CKAP2Q8WWK9 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CKAP2Q8WWK9 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CKAP2Q8WWK9 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.89■□□□□ 0.62
CKAP2Q8WWK9 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.89■□□□□ 0.62
CKAP2Q8WWK9 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
CKAP2Q8WWK9 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
CKAP2Q8WWK9 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CKAP2Q8WWK9 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.89■□□□□ 0.62
CKAP2Q8WWK9 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CKAP2Q8WWK9 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CKAP2Q8WWK9 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CKAP2Q8WWK9 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CKAP2Q8WWK9 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CKAP2Q8WWK9 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CKAP2Q8WWK9 AC012313.1-201ENST00000593393 3059 ntBASIC18.89■□□□□ 0.61
CKAP2Q8WWK9 GNAS-203ENST00000306120 1878 ntBASIC18.89■□□□□ 0.61
CKAP2Q8WWK9 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CKAP2Q8WWK9 AIRN-201ENST00000601203 4374 ntBASIC18.89■□□□□ 0.61
CKAP2Q8WWK9 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.89■□□□□ 0.61
CKAP2Q8WWK9 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CKAP2Q8WWK9 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.89■□□□□ 0.61
CKAP2Q8WWK9 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.89■□□□□ 0.61
CKAP2Q8WWK9 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CKAP2Q8WWK9 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.89■□□□□ 0.61
CKAP2Q8WWK9 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CKAP2Q8WWK9 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.89■□□□□ 0.61
CKAP2Q8WWK9 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.89■□□□□ 0.61
CKAP2Q8WWK9 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CKAP2Q8WWK9 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CKAP2Q8WWK9 AC134043.2-201ENST00000624206 2238 ntBASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms