Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.83■□□□□ 0.77
CCHCR1Q8TD31 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCHCR1Q8TD31 AC073648.6-201ENST00000641589 218 ntBASIC19.83■□□□□ 0.77
CCHCR1Q8TD31 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCHCR1Q8TD31 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCHCR1Q8TD31 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCHCR1Q8TD31 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
CCHCR1Q8TD31 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
CCHCR1Q8TD31 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCHCR1Q8TD31 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.76
CCHCR1Q8TD31 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCHCR1Q8TD31 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CCHCR1Q8TD31 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CCHCR1Q8TD31 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CCHCR1Q8TD31 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCHCR1Q8TD31 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
CCHCR1Q8TD31 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
CCHCR1Q8TD31 AL031598.1-201ENST00000561511 1773 ntBASIC19.83■□□□□ 0.76
CCHCR1Q8TD31 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCHCR1Q8TD31 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCHCR1Q8TD31 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCHCR1Q8TD31 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCHCR1Q8TD31 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCHCR1Q8TD31 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCHCR1Q8TD31 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCHCR1Q8TD31 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCHCR1Q8TD31 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCHCR1Q8TD31 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCHCR1Q8TD31 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCHCR1Q8TD31 ABHD17AP1-201ENST00000358206 933 ntBASIC19.82■□□□□ 0.76
CCHCR1Q8TD31 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.82■□□□□ 0.76
CCHCR1Q8TD31 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.82■□□□□ 0.76
CCHCR1Q8TD31 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCHCR1Q8TD31 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCHCR1Q8TD31 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCHCR1Q8TD31 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCHCR1Q8TD31 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCHCR1Q8TD31 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
CCHCR1Q8TD31 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CCHCR1Q8TD31 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CCHCR1Q8TD31 SDHAP1-207ENST00000440850 2000 ntBASIC19.81■□□□□ 0.76
CCHCR1Q8TD31 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.81■□□□□ 0.76
CCHCR1Q8TD31 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CCHCR1Q8TD31 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCHCR1Q8TD31 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCHCR1Q8TD31 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CCHCR1Q8TD31 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.81■□□□□ 0.76
CCHCR1Q8TD31 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCHCR1Q8TD31 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CCHCR1Q8TD31 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCHCR1Q8TD31 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CCHCR1Q8TD31 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.81■□□□□ 0.76
CCHCR1Q8TD31 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CCHCR1Q8TD31 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCHCR1Q8TD31 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.81■□□□□ 0.76
CCHCR1Q8TD31 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCHCR1Q8TD31 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.81■□□□□ 0.76
CCHCR1Q8TD31 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.81■□□□□ 0.76
CCHCR1Q8TD31 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.81■□□□□ 0.76
CCHCR1Q8TD31 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CCHCR1Q8TD31 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CCHCR1Q8TD31 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.81■□□□□ 0.76
CCHCR1Q8TD31 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCHCR1Q8TD31 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.81■□□□□ 0.76
CCHCR1Q8TD31 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.81■□□□□ 0.76
CCHCR1Q8TD31 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.81■□□□□ 0.76
CCHCR1Q8TD31 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.81■□□□□ 0.76
CCHCR1Q8TD31 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCHCR1Q8TD31 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CCHCR1Q8TD31 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCHCR1Q8TD31 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCHCR1Q8TD31 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCHCR1Q8TD31 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.8■□□□□ 0.76
CCHCR1Q8TD31 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CCHCR1Q8TD31 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCHCR1Q8TD31 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.8■□□□□ 0.76
CCHCR1Q8TD31 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCHCR1Q8TD31 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCHCR1Q8TD31 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCHCR1Q8TD31 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCHCR1Q8TD31 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCHCR1Q8TD31 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCHCR1Q8TD31 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCHCR1Q8TD31 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.8■□□□□ 0.76
CCHCR1Q8TD31 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCHCR1Q8TD31 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.8■□□□□ 0.76
CCHCR1Q8TD31 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CCHCR1Q8TD31 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.8■□□□□ 0.76
CCHCR1Q8TD31 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.8■□□□□ 0.76
CCHCR1Q8TD31 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CCHCR1Q8TD31 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCHCR1Q8TD31 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCHCR1Q8TD31 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CCHCR1Q8TD31 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCHCR1Q8TD31 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCHCR1Q8TD31 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.79■□□□□ 0.76
CCHCR1Q8TD31 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCHCR1Q8TD31 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCHCR1Q8TD31 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.79■□□□□ 0.76
CCHCR1Q8TD31 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms