Protein–RNA interactions for Protein: Q8NF99

ZNF397, Zinc finger protein 397, humanhuman

Predicted RBP Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF397Q8NF99 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF397Q8NF99 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF397Q8NF99 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF397Q8NF99 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF397Q8NF99 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF397Q8NF99 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF397Q8NF99 AC068880.1-201ENST00000507289 2297 ntBASIC21.03■□□□□ 0.96
ZNF397Q8NF99 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF397Q8NF99 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF397Q8NF99 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF397Q8NF99 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
ZNF397Q8NF99 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF397Q8NF99 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC21.03■□□□□ 0.96
ZNF397Q8NF99 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
ZNF397Q8NF99 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF397Q8NF99 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF397Q8NF99 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF397Q8NF99 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.03■□□□□ 0.96
ZNF397Q8NF99 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.03■□□□□ 0.96
ZNF397Q8NF99 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
ZNF397Q8NF99 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
ZNF397Q8NF99 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
ZNF397Q8NF99 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF397Q8NF99 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF397Q8NF99 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF397Q8NF99 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF397Q8NF99 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC21.03■□□□□ 0.96
ZNF397Q8NF99 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF397Q8NF99 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
ZNF397Q8NF99 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.03■□□□□ 0.96
ZNF397Q8NF99 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF397Q8NF99 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF397Q8NF99 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC21.02■□□□□ 0.96
ZNF397Q8NF99 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF397Q8NF99 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
ZNF397Q8NF99 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.02■□□□□ 0.96
ZNF397Q8NF99 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF397Q8NF99 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF397Q8NF99 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.02■□□□□ 0.96
ZNF397Q8NF99 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.02■□□□□ 0.96
ZNF397Q8NF99 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF397Q8NF99 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF397Q8NF99 HLA-B-256ENST00000639848 1089 ntBASIC21.02■□□□□ 0.96
ZNF397Q8NF99 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF397Q8NF99 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF397Q8NF99 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF397Q8NF99 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF397Q8NF99 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
ZNF397Q8NF99 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
ZNF397Q8NF99 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
ZNF397Q8NF99 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
ZNF397Q8NF99 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC21.02■□□□□ 0.95
ZNF397Q8NF99 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
ZNF397Q8NF99 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
ZNF397Q8NF99 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC21.01■□□□□ 0.95
ZNF397Q8NF99 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF397Q8NF99 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC21.01■□□□□ 0.95
ZNF397Q8NF99 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF397Q8NF99 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21.01■□□□□ 0.95
ZNF397Q8NF99 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC21.01■□□□□ 0.95
ZNF397Q8NF99 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF397Q8NF99 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
ZNF397Q8NF99 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
ZNF397Q8NF99 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.01■□□□□ 0.95
ZNF397Q8NF99 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF397Q8NF99 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF397Q8NF99 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF397Q8NF99 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
ZNF397Q8NF99 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF397Q8NF99 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC21.01■□□□□ 0.95
ZNF397Q8NF99 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF397Q8NF99 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF397Q8NF99 AC090164.3-201ENST00000610780 2143 ntBASIC21.01■□□□□ 0.95
ZNF397Q8NF99 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
ZNF397Q8NF99 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC21.01■□□□□ 0.95
ZNF397Q8NF99 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC21■□□□□ 0.95
ZNF397Q8NF99 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC21■□□□□ 0.95
ZNF397Q8NF99 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
ZNF397Q8NF99 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF397Q8NF99 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF397Q8NF99 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF397Q8NF99 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF397Q8NF99 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF397Q8NF99 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF397Q8NF99 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC21■□□□□ 0.95
ZNF397Q8NF99 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF397Q8NF99 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF397Q8NF99 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF397Q8NF99 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21■□□□□ 0.95
ZNF397Q8NF99 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21■□□□□ 0.95
ZNF397Q8NF99 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF397Q8NF99 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21■□□□□ 0.95
ZNF397Q8NF99 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21■□□□□ 0.95
ZNF397Q8NF99 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21■□□□□ 0.95
ZNF397Q8NF99 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
ZNF397Q8NF99 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC21■□□□□ 0.95
ZNF397Q8NF99 USP49-202ENST00000373010 2446 ntTSL 5 BASIC21■□□□□ 0.95
ZNF397Q8NF99 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC21■□□□□ 0.95
ZNF397Q8NF99 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21■□□□□ 0.95
ZNF397Q8NF99 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms