Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HIPK4Q8NE63 AC008694.1-202ENST00000636953 945 ntBASIC18.48■□□□□ 0.55
HIPK4Q8NE63 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.48■□□□□ 0.55
HIPK4Q8NE63 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
HIPK4Q8NE63 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.48■□□□□ 0.55
HIPK4Q8NE63 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HIPK4Q8NE63 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
HIPK4Q8NE63 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HIPK4Q8NE63 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
HIPK4Q8NE63 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HIPK4Q8NE63 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
HIPK4Q8NE63 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.48■□□□□ 0.55
HIPK4Q8NE63 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
HIPK4Q8NE63 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HIPK4Q8NE63 Z98044.1-201ENST00000632503 1764 ntBASIC18.47■□□□□ 0.55
HIPK4Q8NE63 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIPK4Q8NE63 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIPK4Q8NE63 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
HIPK4Q8NE63 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIPK4Q8NE63 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIPK4Q8NE63 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HIPK4Q8NE63 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIPK4Q8NE63 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIPK4Q8NE63 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HIPK4Q8NE63 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HIPK4Q8NE63 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIPK4Q8NE63 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIPK4Q8NE63 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.47■□□□□ 0.55
HIPK4Q8NE63 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
HIPK4Q8NE63 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.47■□□□□ 0.55
HIPK4Q8NE63 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIPK4Q8NE63 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.47■□□□□ 0.55
HIPK4Q8NE63 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.47■□□□□ 0.55
HIPK4Q8NE63 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.47■□□□□ 0.55
HIPK4Q8NE63 AC011767.1-201ENST00000617410 1153 ntBASIC18.47■□□□□ 0.55
HIPK4Q8NE63 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HIPK4Q8NE63 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIPK4Q8NE63 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIPK4Q8NE63 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.47■□□□□ 0.55
HIPK4Q8NE63 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.47■□□□□ 0.55
HIPK4Q8NE63 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIPK4Q8NE63 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIPK4Q8NE63 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIPK4Q8NE63 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIPK4Q8NE63 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
HIPK4Q8NE63 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.47■□□□□ 0.55
HIPK4Q8NE63 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HIPK4Q8NE63 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.46■□□□□ 0.55
HIPK4Q8NE63 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
HIPK4Q8NE63 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIPK4Q8NE63 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.46■□□□□ 0.55
HIPK4Q8NE63 PHGDH-210ENST00000641115 1638 ntBASIC18.46■□□□□ 0.55
HIPK4Q8NE63 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.46■□□□□ 0.55
HIPK4Q8NE63 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
HIPK4Q8NE63 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.46■□□□□ 0.55
HIPK4Q8NE63 AC020916.1-201ENST00000587762 1774 ntBASIC18.46■□□□□ 0.55
HIPK4Q8NE63 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
HIPK4Q8NE63 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIPK4Q8NE63 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIPK4Q8NE63 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.46■□□□□ 0.55
HIPK4Q8NE63 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.46■□□□□ 0.55
HIPK4Q8NE63 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIPK4Q8NE63 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.46■□□□□ 0.55
HIPK4Q8NE63 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIPK4Q8NE63 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIPK4Q8NE63 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIPK4Q8NE63 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIPK4Q8NE63 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HIPK4Q8NE63 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIPK4Q8NE63 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIPK4Q8NE63 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
HIPK4Q8NE63 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.46■□□□□ 0.55
HIPK4Q8NE63 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIPK4Q8NE63 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
HIPK4Q8NE63 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIPK4Q8NE63 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.46■□□□□ 0.54
HIPK4Q8NE63 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.46■□□□□ 0.54
HIPK4Q8NE63 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.45■□□□□ 0.54
HIPK4Q8NE63 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
HIPK4Q8NE63 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HIPK4Q8NE63 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HIPK4Q8NE63 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HIPK4Q8NE63 AC006015.1-201ENST00000429970 570 ntBASIC18.45■□□□□ 0.54
HIPK4Q8NE63 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.45■□□□□ 0.54
HIPK4Q8NE63 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HIPK4Q8NE63 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
HIPK4Q8NE63 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.45■□□□□ 0.54
HIPK4Q8NE63 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
HIPK4Q8NE63 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.45■□□□□ 0.54
HIPK4Q8NE63 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
HIPK4Q8NE63 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.45■□□□□ 0.54
HIPK4Q8NE63 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
HIPK4Q8NE63 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HIPK4Q8NE63 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HIPK4Q8NE63 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.45■□□□□ 0.54
HIPK4Q8NE63 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HIPK4Q8NE63 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.45■□□□□ 0.54
HIPK4Q8NE63 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.45■□□□□ 0.54
HIPK4Q8NE63 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HIPK4Q8NE63 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms