Protein–RNA interactions for Protein: Q8N7R7

CCNYL1, Cyclin-Y-like protein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL1Q8N7R7 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCNYL1Q8N7R7 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCNYL1Q8N7R7 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.8■□□□□ 0.6
CCNYL1Q8N7R7 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCNYL1Q8N7R7 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.8■□□□□ 0.6
CCNYL1Q8N7R7 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CCNYL1Q8N7R7 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCNYL1Q8N7R7 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCNYL1Q8N7R7 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.8■□□□□ 0.6
CCNYL1Q8N7R7 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCNYL1Q8N7R7 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCNYL1Q8N7R7 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.8■□□□□ 0.6
CCNYL1Q8N7R7 TUBB8P6-201ENST00000436895 1288 ntBASIC18.8■□□□□ 0.6
CCNYL1Q8N7R7 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.8■□□□□ 0.6
CCNYL1Q8N7R7 PNMA6B-201ENST00000538162 1200 ntBASIC18.8■□□□□ 0.6
CCNYL1Q8N7R7 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.8■□□□□ 0.6
CCNYL1Q8N7R7 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCNYL1Q8N7R7 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.8■□□□□ 0.6
CCNYL1Q8N7R7 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCNYL1Q8N7R7 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CCNYL1Q8N7R7 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.8■□□□□ 0.6
CCNYL1Q8N7R7 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.8■□□□□ 0.6
CCNYL1Q8N7R7 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCNYL1Q8N7R7 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CCNYL1Q8N7R7 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCNYL1Q8N7R7 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCNYL1Q8N7R7 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CCNYL1Q8N7R7 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCNYL1Q8N7R7 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCNYL1Q8N7R7 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CCNYL1Q8N7R7 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CCNYL1Q8N7R7 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.79■□□□□ 0.6
CCNYL1Q8N7R7 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.79■□□□□ 0.6
CCNYL1Q8N7R7 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCNYL1Q8N7R7 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.79■□□□□ 0.6
CCNYL1Q8N7R7 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCNYL1Q8N7R7 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCNYL1Q8N7R7 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.79■□□□□ 0.6
CCNYL1Q8N7R7 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.79■□□□□ 0.6
CCNYL1Q8N7R7 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCNYL1Q8N7R7 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCNYL1Q8N7R7 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.79■□□□□ 0.6
CCNYL1Q8N7R7 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCNYL1Q8N7R7 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCNYL1Q8N7R7 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCNYL1Q8N7R7 GUSBP6-202ENST00000438529 1198 ntBASIC18.79■□□□□ 0.6
CCNYL1Q8N7R7 TSPY6P-201ENST00000448518 926 ntBASIC18.79■□□□□ 0.6
CCNYL1Q8N7R7 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.79■□□□□ 0.6
CCNYL1Q8N7R7 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.79■□□□□ 0.6
CCNYL1Q8N7R7 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.79■□□□□ 0.6
CCNYL1Q8N7R7 KRT18P16-201ENST00000510337 1294 ntBASIC18.79■□□□□ 0.6
CCNYL1Q8N7R7 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCNYL1Q8N7R7 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.79■□□□□ 0.6
CCNYL1Q8N7R7 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.79■□□□□ 0.6
CCNYL1Q8N7R7 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.79■□□□□ 0.6
CCNYL1Q8N7R7 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCNYL1Q8N7R7 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCNYL1Q8N7R7 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCNYL1Q8N7R7 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
CCNYL1Q8N7R7 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCNYL1Q8N7R7 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCNYL1Q8N7R7 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCNYL1Q8N7R7 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CCNYL1Q8N7R7 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCNYL1Q8N7R7 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCNYL1Q8N7R7 AL512353.2-201ENST00000448759 1962 ntBASIC18.79■□□□□ 0.6
CCNYL1Q8N7R7 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
CCNYL1Q8N7R7 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCNYL1Q8N7R7 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCNYL1Q8N7R7 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.78■□□□□ 0.6
CCNYL1Q8N7R7 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CCNYL1Q8N7R7 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
CCNYL1Q8N7R7 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCNYL1Q8N7R7 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.78■□□□□ 0.6
CCNYL1Q8N7R7 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCNYL1Q8N7R7 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCNYL1Q8N7R7 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCNYL1Q8N7R7 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCNYL1Q8N7R7 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.78■□□□□ 0.6
CCNYL1Q8N7R7 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCNYL1Q8N7R7 AC093525.10-201ENST00000625130 1569 ntBASIC18.78■□□□□ 0.6
CCNYL1Q8N7R7 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCNYL1Q8N7R7 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCNYL1Q8N7R7 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCNYL1Q8N7R7 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.78■□□□□ 0.6
CCNYL1Q8N7R7 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.78■□□□□ 0.6
CCNYL1Q8N7R7 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.78■□□□□ 0.6
CCNYL1Q8N7R7 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCNYL1Q8N7R7 AC060766.5-201ENST00000590539 871 ntBASIC18.78■□□□□ 0.6
CCNYL1Q8N7R7 AC120498.8-201ENST00000614275 531 ntBASIC18.78■□□□□ 0.6
CCNYL1Q8N7R7 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.78■□□□□ 0.6
CCNYL1Q8N7R7 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CCNYL1Q8N7R7 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.78■□□□□ 0.6
CCNYL1Q8N7R7 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.78■□□□□ 0.6
CCNYL1Q8N7R7 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCNYL1Q8N7R7 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCNYL1Q8N7R7 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCNYL1Q8N7R7 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCNYL1Q8N7R7 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCNYL1Q8N7R7 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms