Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
LINC01561Q8N1V8 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01561Q8N1V8 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC01561Q8N1V8 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
LINC01561Q8N1V8 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01561Q8N1V8 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC12.78□□□□□ -0.36
LINC01561Q8N1V8 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01561Q8N1V8 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC12.78□□□□□ -0.36
LINC01561Q8N1V8 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
LINC01561Q8N1V8 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01561Q8N1V8 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01561Q8N1V8 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01561Q8N1V8 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01561Q8N1V8 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC01561Q8N1V8 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC01561Q8N1V8 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01561Q8N1V8 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC12.78□□□□□ -0.36
LINC01561Q8N1V8 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC01561Q8N1V8 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC01561Q8N1V8 PHB2-213ENST00000546111 858 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC01561Q8N1V8 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC01561Q8N1V8 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01561Q8N1V8 AC092118.2-201ENST00000613495 667 ntBASIC12.78□□□□□ -0.36
LINC01561Q8N1V8 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01561Q8N1V8 AC006557.6-201ENST00000623071 864 ntBASIC12.78□□□□□ -0.36
LINC01561Q8N1V8 HLA-B-256ENST00000639848 1089 ntBASIC12.78□□□□□ -0.36
LINC01561Q8N1V8 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01561Q8N1V8 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01561Q8N1V8 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01561Q8N1V8 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01561Q8N1V8 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01561Q8N1V8 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC01561Q8N1V8 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC12.78□□□□□ -0.36
LINC01561Q8N1V8 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01561Q8N1V8 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
LINC01561Q8N1V8 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
LINC01561Q8N1V8 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01561Q8N1V8 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC12.78□□□□□ -0.36
LINC01561Q8N1V8 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
LINC01561Q8N1V8 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC01561Q8N1V8 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC12.77□□□□□ -0.36
LINC01561Q8N1V8 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC01561Q8N1V8 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC12.77□□□□□ -0.36
LINC01561Q8N1V8 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
LINC01561Q8N1V8 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC12.77□□□□□ -0.36
LINC01561Q8N1V8 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC01561Q8N1V8 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC01561Q8N1V8 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
LINC01561Q8N1V8 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
LINC01561Q8N1V8 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
LINC01561Q8N1V8 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC01561Q8N1V8 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
LINC01561Q8N1V8 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01561Q8N1V8 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC12.77□□□□□ -0.37
LINC01561Q8N1V8 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01561Q8N1V8 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01561Q8N1V8 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01561Q8N1V8 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01561Q8N1V8 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01561Q8N1V8 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC12.77□□□□□ -0.37
LINC01561Q8N1V8 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC12.77□□□□□ -0.37
LINC01561Q8N1V8 OAS3-207ENST00000551007 998 ntTSL 2 BASIC12.77□□□□□ -0.37
LINC01561Q8N1V8 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC12.77□□□□□ -0.37
LINC01561Q8N1V8 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC12.77□□□□□ -0.37
LINC01561Q8N1V8 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC12.77□□□□□ -0.37
LINC01561Q8N1V8 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC12.77□□□□□ -0.37
LINC01561Q8N1V8 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC12.77□□□□□ -0.37
LINC01561Q8N1V8 COBL-210ENST00000632460 1941 ntTSL 5 BASIC12.77□□□□□ -0.37
LINC01561Q8N1V8 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
LINC01561Q8N1V8 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
LINC01561Q8N1V8 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01561Q8N1V8 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC12.77□□□□□ -0.37
LINC01561Q8N1V8 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
LINC01561Q8N1V8 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01561Q8N1V8 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC12.77□□□□□ -0.37
LINC01561Q8N1V8 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01561Q8N1V8 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
LINC01561Q8N1V8 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01561Q8N1V8 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01561Q8N1V8 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
LINC01561Q8N1V8 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01561Q8N1V8 AC011270.2-201ENST00000624293 2550 ntBASIC12.76□□□□□ -0.37
LINC01561Q8N1V8 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01561Q8N1V8 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01561Q8N1V8 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
LINC01561Q8N1V8 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01561Q8N1V8 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
LINC01561Q8N1V8 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC12.76□□□□□ -0.37
LINC01561Q8N1V8 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC12.76□□□□□ -0.37
LINC01561Q8N1V8 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01561Q8N1V8 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC12.76□□□□□ -0.37
LINC01561Q8N1V8 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01561Q8N1V8 DUSP5P2-201ENST00000426873 1033 ntBASIC12.76□□□□□ -0.37
LINC01561Q8N1V8 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC12.76□□□□□ -0.37
LINC01561Q8N1V8 PNN-205ENST00000556530 601 ntTSL 2 BASIC12.76□□□□□ -0.37
LINC01561Q8N1V8 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC12.76□□□□□ -0.37
LINC01561Q8N1V8 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC12.76□□□□□ -0.37
LINC01561Q8N1V8 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC12.76□□□□□ -0.37
LINC01561Q8N1V8 MYC-208ENST00000641036 567 ntBASIC12.76□□□□□ -0.37
LINC01561Q8N1V8 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms