Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPNE9Q8IYJ1 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CPNE9Q8IYJ1 AP002982.1-201ENST00000492365 877 ntBASIC18.84■□□□□ 0.61
CPNE9Q8IYJ1 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.84■□□□□ 0.61
CPNE9Q8IYJ1 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.84■□□□□ 0.61
CPNE9Q8IYJ1 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.84■□□□□ 0.61
CPNE9Q8IYJ1 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.84■□□□□ 0.61
CPNE9Q8IYJ1 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.84■□□□□ 0.61
CPNE9Q8IYJ1 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CPNE9Q8IYJ1 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.84■□□□□ 0.61
CPNE9Q8IYJ1 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPNE9Q8IYJ1 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CPNE9Q8IYJ1 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.84■□□□□ 0.61
CPNE9Q8IYJ1 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CPNE9Q8IYJ1 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPNE9Q8IYJ1 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CPNE9Q8IYJ1 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPNE9Q8IYJ1 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CPNE9Q8IYJ1 KRT8P41-201ENST00000533985 1514 ntBASIC18.84■□□□□ 0.61
CPNE9Q8IYJ1 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPNE9Q8IYJ1 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPNE9Q8IYJ1 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CPNE9Q8IYJ1 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.61
CPNE9Q8IYJ1 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.83■□□□□ 0.61
CPNE9Q8IYJ1 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.83■□□□□ 0.61
CPNE9Q8IYJ1 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CPNE9Q8IYJ1 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CPNE9Q8IYJ1 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
CPNE9Q8IYJ1 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CPNE9Q8IYJ1 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.83■□□□□ 0.61
CPNE9Q8IYJ1 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CPNE9Q8IYJ1 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
CPNE9Q8IYJ1 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
CPNE9Q8IYJ1 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CPNE9Q8IYJ1 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.83■□□□□ 0.6
CPNE9Q8IYJ1 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.83■□□□□ 0.6
CPNE9Q8IYJ1 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.83■□□□□ 0.6
CPNE9Q8IYJ1 RPS2P4-201ENST00000476944 856 ntBASIC18.83■□□□□ 0.6
CPNE9Q8IYJ1 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CPNE9Q8IYJ1 Z85996.1-201ENST00000494644 937 ntBASIC18.83■□□□□ 0.6
CPNE9Q8IYJ1 AL445675.2-201ENST00000620291 557 ntBASIC18.83■□□□□ 0.6
CPNE9Q8IYJ1 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.83■□□□□ 0.6
CPNE9Q8IYJ1 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CPNE9Q8IYJ1 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CPNE9Q8IYJ1 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CPNE9Q8IYJ1 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.83■□□□□ 0.6
CPNE9Q8IYJ1 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CPNE9Q8IYJ1 AC006333.2-201ENST00000607957 2099 ntBASIC18.83■□□□□ 0.6
CPNE9Q8IYJ1 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CPNE9Q8IYJ1 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CPNE9Q8IYJ1 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CPNE9Q8IYJ1 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CPNE9Q8IYJ1 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CPNE9Q8IYJ1 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.82■□□□□ 0.6
CPNE9Q8IYJ1 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CPNE9Q8IYJ1 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.82■□□□□ 0.6
CPNE9Q8IYJ1 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CPNE9Q8IYJ1 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.82■□□□□ 0.6
CPNE9Q8IYJ1 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CPNE9Q8IYJ1 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.82■□□□□ 0.6
CPNE9Q8IYJ1 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CPNE9Q8IYJ1 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.82■□□□□ 0.6
CPNE9Q8IYJ1 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.82■□□□□ 0.6
CPNE9Q8IYJ1 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CPNE9Q8IYJ1 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CPNE9Q8IYJ1 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CPNE9Q8IYJ1 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CPNE9Q8IYJ1 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CPNE9Q8IYJ1 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CPNE9Q8IYJ1 TSPY23P-201ENST00000440136 739 ntBASIC18.82■□□□□ 0.6
CPNE9Q8IYJ1 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.82■□□□□ 0.6
CPNE9Q8IYJ1 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.82■□□□□ 0.6
CPNE9Q8IYJ1 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.82■□□□□ 0.6
CPNE9Q8IYJ1 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.82■□□□□ 0.6
CPNE9Q8IYJ1 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.82■□□□□ 0.6
CPNE9Q8IYJ1 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.82■□□□□ 0.6
CPNE9Q8IYJ1 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.82■□□□□ 0.6
CPNE9Q8IYJ1 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.82■□□□□ 0.6
CPNE9Q8IYJ1 FEM1AP3-201ENST00000403722 1741 ntBASIC18.82■□□□□ 0.6
CPNE9Q8IYJ1 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.82■□□□□ 0.6
CPNE9Q8IYJ1 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CPNE9Q8IYJ1 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CPNE9Q8IYJ1 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.82■□□□□ 0.6
CPNE9Q8IYJ1 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CPNE9Q8IYJ1 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.82■□□□□ 0.6
CPNE9Q8IYJ1 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.82■□□□□ 0.6
CPNE9Q8IYJ1 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
CPNE9Q8IYJ1 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CPNE9Q8IYJ1 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE9Q8IYJ1 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE9Q8IYJ1 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE9Q8IYJ1 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE9Q8IYJ1 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE9Q8IYJ1 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE9Q8IYJ1 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE9Q8IYJ1 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE9Q8IYJ1 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE9Q8IYJ1 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.81■□□□□ 0.6
CPNE9Q8IYJ1 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE9Q8IYJ1 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms