Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF135Q8IUD6 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.18■□□□□ 0.82
RNF135Q8IUD6 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
RNF135Q8IUD6 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
RNF135Q8IUD6 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF135Q8IUD6 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF135Q8IUD6 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
RNF135Q8IUD6 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.18■□□□□ 0.82
RNF135Q8IUD6 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.18■□□□□ 0.82
RNF135Q8IUD6 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.18■□□□□ 0.82
RNF135Q8IUD6 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF135Q8IUD6 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RNF135Q8IUD6 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.18■□□□□ 0.82
RNF135Q8IUD6 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.18■□□□□ 0.82
RNF135Q8IUD6 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.18■□□□□ 0.82
RNF135Q8IUD6 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.18■□□□□ 0.82
RNF135Q8IUD6 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.18■□□□□ 0.82
RNF135Q8IUD6 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF135Q8IUD6 AC092119.3-201ENST00000612618 583 ntBASIC20.18■□□□□ 0.82
RNF135Q8IUD6 HLA-A-209ENST00000638375 975 ntBASIC20.18■□□□□ 0.82
RNF135Q8IUD6 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
RNF135Q8IUD6 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.18■□□□□ 0.82
RNF135Q8IUD6 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF135Q8IUD6 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF135Q8IUD6 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RNF135Q8IUD6 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF135Q8IUD6 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RNF135Q8IUD6 KRT8P45-201ENST00000414328 1447 ntBASIC20.18■□□□□ 0.82
RNF135Q8IUD6 KRT16P6-202ENST00000425692 1426 ntBASIC20.18■□□□□ 0.82
RNF135Q8IUD6 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF135Q8IUD6 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF135Q8IUD6 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF135Q8IUD6 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RNF135Q8IUD6 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF135Q8IUD6 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
RNF135Q8IUD6 TFP1-202ENST00000475455 1573 ntBASIC20.17■□□□□ 0.82
RNF135Q8IUD6 AC116351.2-201ENST00000606540 1585 ntBASIC20.17■□□□□ 0.82
RNF135Q8IUD6 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF135Q8IUD6 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF135Q8IUD6 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF135Q8IUD6 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF135Q8IUD6 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.17■□□□□ 0.82
RNF135Q8IUD6 SKP2-204ENST00000508514 821 ntTSL 3 BASIC20.17■□□□□ 0.82
RNF135Q8IUD6 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.17■□□□□ 0.82
RNF135Q8IUD6 AC111152.3-201ENST00000569699 673 ntBASIC20.17■□□□□ 0.82
RNF135Q8IUD6 NPAP1P7-201ENST00000613027 823 ntBASIC20.17■□□□□ 0.82
RNF135Q8IUD6 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF135Q8IUD6 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
RNF135Q8IUD6 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF135Q8IUD6 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.17■□□□□ 0.82
RNF135Q8IUD6 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF135Q8IUD6 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF135Q8IUD6 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC20.17■□□□□ 0.82
RNF135Q8IUD6 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF135Q8IUD6 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.17■□□□□ 0.82
RNF135Q8IUD6 AL691432.2-201ENST00000607222 2038 ntBASIC20.17■□□□□ 0.82
RNF135Q8IUD6 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF135Q8IUD6 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RNF135Q8IUD6 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF135Q8IUD6 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF135Q8IUD6 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
RNF135Q8IUD6 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF135Q8IUD6 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.16■□□□□ 0.82
RNF135Q8IUD6 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.16■□□□□ 0.82
RNF135Q8IUD6 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF135Q8IUD6 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC20.16■□□□□ 0.82
RNF135Q8IUD6 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
RNF135Q8IUD6 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.16■□□□□ 0.82
RNF135Q8IUD6 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.16■□□□□ 0.82
RNF135Q8IUD6 CALM1-205ENST00000553542 877 ntTSL 5 BASIC20.16■□□□□ 0.82
RNF135Q8IUD6 CKBP1-201ENST00000565489 1086 ntBASIC20.16■□□□□ 0.82
RNF135Q8IUD6 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.16■□□□□ 0.82
RNF135Q8IUD6 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC20.16■□□□□ 0.82
RNF135Q8IUD6 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
RNF135Q8IUD6 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.16■□□□□ 0.82
RNF135Q8IUD6 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF135Q8IUD6 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RNF135Q8IUD6 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF135Q8IUD6 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF135Q8IUD6 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.15■□□□□ 0.82
RNF135Q8IUD6 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RNF135Q8IUD6 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF135Q8IUD6 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
RNF135Q8IUD6 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
RNF135Q8IUD6 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RNF135Q8IUD6 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC20.15■□□□□ 0.82
RNF135Q8IUD6 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RNF135Q8IUD6 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.15■□□□□ 0.82
RNF135Q8IUD6 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
RNF135Q8IUD6 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RNF135Q8IUD6 HYMAI.1-201ENST00000620949 238 ntBASIC20.15■□□□□ 0.82
RNF135Q8IUD6 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
RNF135Q8IUD6 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC20.15■□□□□ 0.82
RNF135Q8IUD6 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF135Q8IUD6 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RNF135Q8IUD6 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.15■□□□□ 0.82
RNF135Q8IUD6 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF135Q8IUD6 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF135Q8IUD6 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RNF135Q8IUD6 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms