Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RTL4Q6ZR62 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.84■□□□□ 0.45
RTL4Q6ZR62 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RTL4Q6ZR62 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.84■□□□□ 0.45
RTL4Q6ZR62 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.84■□□□□ 0.45
RTL4Q6ZR62 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.84■□□□□ 0.45
RTL4Q6ZR62 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.84■□□□□ 0.45
RTL4Q6ZR62 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTL4Q6ZR62 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.84■□□□□ 0.45
RTL4Q6ZR62 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
RTL4Q6ZR62 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
RTL4Q6ZR62 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RTL4Q6ZR62 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTL4Q6ZR62 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.83■□□□□ 0.45
RTL4Q6ZR62 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.83■□□□□ 0.45
RTL4Q6ZR62 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RTL4Q6ZR62 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RTL4Q6ZR62 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RTL4Q6ZR62 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
RTL4Q6ZR62 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.83■□□□□ 0.45
RTL4Q6ZR62 LETM1P2-201ENST00000597330 2178 ntBASIC17.83■□□□□ 0.45
RTL4Q6ZR62 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.83■□□□□ 0.45
RTL4Q6ZR62 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RTL4Q6ZR62 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
RTL4Q6ZR62 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
RTL4Q6ZR62 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RTL4Q6ZR62 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RTL4Q6ZR62 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RTL4Q6ZR62 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.83■□□□□ 0.44
RTL4Q6ZR62 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RTL4Q6ZR62 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RTL4Q6ZR62 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RTL4Q6ZR62 RBM17P1-201ENST00000453646 1190 ntBASIC17.83■□□□□ 0.44
RTL4Q6ZR62 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.83■□□□□ 0.44
RTL4Q6ZR62 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.83■□□□□ 0.44
RTL4Q6ZR62 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.83■□□□□ 0.44
RTL4Q6ZR62 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RTL4Q6ZR62 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RTL4Q6ZR62 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RTL4Q6ZR62 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RTL4Q6ZR62 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
RTL4Q6ZR62 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
RTL4Q6ZR62 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RTL4Q6ZR62 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RTL4Q6ZR62 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
RTL4Q6ZR62 AC020763.4-201ENST00000623414 4170 ntBASIC17.83■□□□□ 0.44
RTL4Q6ZR62 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
RTL4Q6ZR62 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.83■□□□□ 0.44
RTL4Q6ZR62 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.82■□□□□ 0.44
RTL4Q6ZR62 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.82■□□□□ 0.44
RTL4Q6ZR62 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
RTL4Q6ZR62 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RTL4Q6ZR62 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
RTL4Q6ZR62 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTL4Q6ZR62 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTL4Q6ZR62 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
RTL4Q6ZR62 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RTL4Q6ZR62 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
RTL4Q6ZR62 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTL4Q6ZR62 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.82■□□□□ 0.44
RTL4Q6ZR62 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.82■□□□□ 0.44
RTL4Q6ZR62 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.82■□□□□ 0.44
RTL4Q6ZR62 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.82■□□□□ 0.44
RTL4Q6ZR62 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.82■□□□□ 0.44
RTL4Q6ZR62 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.82■□□□□ 0.44
RTL4Q6ZR62 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.82■□□□□ 0.44
RTL4Q6ZR62 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.82■□□□□ 0.44
RTL4Q6ZR62 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTL4Q6ZR62 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTL4Q6ZR62 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTL4Q6ZR62 AC098818.2-201ENST00000564925 2320 ntBASIC17.82■□□□□ 0.44
RTL4Q6ZR62 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTL4Q6ZR62 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
RTL4Q6ZR62 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RTL4Q6ZR62 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTL4Q6ZR62 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTL4Q6ZR62 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTL4Q6ZR62 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RTL4Q6ZR62 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
RTL4Q6ZR62 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
RTL4Q6ZR62 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTL4Q6ZR62 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTL4Q6ZR62 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTL4Q6ZR62 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTL4Q6ZR62 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTL4Q6ZR62 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.81■□□□□ 0.44
RTL4Q6ZR62 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.81■□□□□ 0.44
RTL4Q6ZR62 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTL4Q6ZR62 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RTL4Q6ZR62 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTL4Q6ZR62 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTL4Q6ZR62 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.81■□□□□ 0.44
RTL4Q6ZR62 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
RTL4Q6ZR62 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.81■□□□□ 0.44
RTL4Q6ZR62 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.81■□□□□ 0.44
RTL4Q6ZR62 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTL4Q6ZR62 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.81■□□□□ 0.44
RTL4Q6ZR62 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.81■□□□□ 0.44
RTL4Q6ZR62 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.81■□□□□ 0.44
RTL4Q6ZR62 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms