Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRFN4Q6PJG9 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LRFN4Q6PJG9 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
LRFN4Q6PJG9 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRFN4Q6PJG9 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LRFN4Q6PJG9 KRT16P5-201ENST00000455284 522 ntBASIC17.13■□□□□ 0.33
LRFN4Q6PJG9 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRFN4Q6PJG9 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
LRFN4Q6PJG9 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.13■□□□□ 0.33
LRFN4Q6PJG9 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LRFN4Q6PJG9 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.13■□□□□ 0.33
LRFN4Q6PJG9 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.13■□□□□ 0.33
LRFN4Q6PJG9 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LRFN4Q6PJG9 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.13■□□□□ 0.33
LRFN4Q6PJG9 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LRFN4Q6PJG9 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.13■□□□□ 0.33
LRFN4Q6PJG9 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
LRFN4Q6PJG9 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.13■□□□□ 0.33
LRFN4Q6PJG9 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRFN4Q6PJG9 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.13■□□□□ 0.33
LRFN4Q6PJG9 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.13■□□□□ 0.33
LRFN4Q6PJG9 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.13■□□□□ 0.33
LRFN4Q6PJG9 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.13■□□□□ 0.33
LRFN4Q6PJG9 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.13■□□□□ 0.33
LRFN4Q6PJG9 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.13■□□□□ 0.33
LRFN4Q6PJG9 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRFN4Q6PJG9 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRFN4Q6PJG9 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRFN4Q6PJG9 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
LRFN4Q6PJG9 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LRFN4Q6PJG9 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRFN4Q6PJG9 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRFN4Q6PJG9 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRFN4Q6PJG9 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
LRFN4Q6PJG9 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRFN4Q6PJG9 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRFN4Q6PJG9 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRFN4Q6PJG9 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LRFN4Q6PJG9 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
LRFN4Q6PJG9 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRFN4Q6PJG9 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRFN4Q6PJG9 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.12■□□□□ 0.33
LRFN4Q6PJG9 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRFN4Q6PJG9 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRFN4Q6PJG9 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRFN4Q6PJG9 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LRFN4Q6PJG9 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
LRFN4Q6PJG9 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.12■□□□□ 0.33
LRFN4Q6PJG9 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
LRFN4Q6PJG9 RPPH1-201ENST00000516869 333 ntBASIC17.12■□□□□ 0.33
LRFN4Q6PJG9 C1QBPP2-201ENST00000528754 825 ntBASIC17.12■□□□□ 0.33
LRFN4Q6PJG9 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.12■□□□□ 0.33
LRFN4Q6PJG9 C1QL1P1-201ENST00000568105 661 ntBASIC17.12■□□□□ 0.33
LRFN4Q6PJG9 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
LRFN4Q6PJG9 SDHAP1-207ENST00000440850 2000 ntBASIC17.12■□□□□ 0.33
LRFN4Q6PJG9 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRFN4Q6PJG9 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.12■□□□□ 0.33
LRFN4Q6PJG9 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
LRFN4Q6PJG9 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
LRFN4Q6PJG9 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.12■□□□□ 0.33
LRFN4Q6PJG9 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRFN4Q6PJG9 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.12■□□□□ 0.33
LRFN4Q6PJG9 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.12■□□□□ 0.33
LRFN4Q6PJG9 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.12■□□□□ 0.33
LRFN4Q6PJG9 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRFN4Q6PJG9 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.11■□□□□ 0.33
LRFN4Q6PJG9 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRFN4Q6PJG9 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRFN4Q6PJG9 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRFN4Q6PJG9 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.11■□□□□ 0.33
LRFN4Q6PJG9 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.11■□□□□ 0.33
LRFN4Q6PJG9 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRFN4Q6PJG9 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRFN4Q6PJG9 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRFN4Q6PJG9 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.11■□□□□ 0.33
LRFN4Q6PJG9 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.11■□□□□ 0.33
LRFN4Q6PJG9 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRFN4Q6PJG9 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
LRFN4Q6PJG9 KRT18P29-201ENST00000397031 1267 ntBASIC17.11■□□□□ 0.33
LRFN4Q6PJG9 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.11■□□□□ 0.33
LRFN4Q6PJG9 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.11■□□□□ 0.33
LRFN4Q6PJG9 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRFN4Q6PJG9 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.11■□□□□ 0.33
LRFN4Q6PJG9 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRFN4Q6PJG9 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
LRFN4Q6PJG9 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.11■□□□□ 0.33
LRFN4Q6PJG9 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
LRFN4Q6PJG9 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRFN4Q6PJG9 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRFN4Q6PJG9 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRFN4Q6PJG9 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRFN4Q6PJG9 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.11■□□□□ 0.33
LRFN4Q6PJG9 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.11■□□□□ 0.33
LRFN4Q6PJG9 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRFN4Q6PJG9 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRFN4Q6PJG9 AC005332.8-201ENST00000622750 2735 ntBASIC17.11■□□□□ 0.33
LRFN4Q6PJG9 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRFN4Q6PJG9 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
LRFN4Q6PJG9 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRFN4Q6PJG9 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms