Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RFWD3Q6PCD5 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.84■□□□□ 0.77
RFWD3Q6PCD5 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFWD3Q6PCD5 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFWD3Q6PCD5 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.84■□□□□ 0.77
RFWD3Q6PCD5 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.84■□□□□ 0.77
RFWD3Q6PCD5 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFWD3Q6PCD5 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
RFWD3Q6PCD5 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.84■□□□□ 0.77
RFWD3Q6PCD5 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RFWD3Q6PCD5 MFAP1P1-201ENST00000442257 1255 ntBASIC19.84■□□□□ 0.77
RFWD3Q6PCD5 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.84■□□□□ 0.77
RFWD3Q6PCD5 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.84■□□□□ 0.77
RFWD3Q6PCD5 AP005242.2-201ENST00000580065 1175 ntBASIC19.84■□□□□ 0.77
RFWD3Q6PCD5 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.84■□□□□ 0.77
RFWD3Q6PCD5 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.84■□□□□ 0.77
RFWD3Q6PCD5 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
RFWD3Q6PCD5 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFWD3Q6PCD5 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFWD3Q6PCD5 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFWD3Q6PCD5 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.84■□□□□ 0.77
RFWD3Q6PCD5 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFWD3Q6PCD5 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
RFWD3Q6PCD5 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RFWD3Q6PCD5 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RFWD3Q6PCD5 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RFWD3Q6PCD5 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RFWD3Q6PCD5 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.83■□□□□ 0.77
RFWD3Q6PCD5 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.83■□□□□ 0.77
RFWD3Q6PCD5 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.83■□□□□ 0.77
RFWD3Q6PCD5 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.83■□□□□ 0.77
RFWD3Q6PCD5 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.83■□□□□ 0.77
RFWD3Q6PCD5 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.83■□□□□ 0.77
RFWD3Q6PCD5 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.83■□□□□ 0.77
RFWD3Q6PCD5 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.83■□□□□ 0.77
RFWD3Q6PCD5 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.83■□□□□ 0.77
RFWD3Q6PCD5 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.83■□□□□ 0.76
RFWD3Q6PCD5 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RFWD3Q6PCD5 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RFWD3Q6PCD5 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
RFWD3Q6PCD5 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
RFWD3Q6PCD5 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RFWD3Q6PCD5 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RFWD3Q6PCD5 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.82■□□□□ 0.76
RFWD3Q6PCD5 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RFWD3Q6PCD5 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RFWD3Q6PCD5 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RFWD3Q6PCD5 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFWD3Q6PCD5 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFWD3Q6PCD5 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RFWD3Q6PCD5 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.82■□□□□ 0.76
RFWD3Q6PCD5 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RFWD3Q6PCD5 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
RFWD3Q6PCD5 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFWD3Q6PCD5 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
RFWD3Q6PCD5 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
RFWD3Q6PCD5 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFWD3Q6PCD5 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RFWD3Q6PCD5 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFWD3Q6PCD5 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.82■□□□□ 0.76
RFWD3Q6PCD5 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFWD3Q6PCD5 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.82■□□□□ 0.76
RFWD3Q6PCD5 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFWD3Q6PCD5 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFWD3Q6PCD5 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.82■□□□□ 0.76
RFWD3Q6PCD5 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
RFWD3Q6PCD5 AC096733.2-201ENST00000609937 1394 ntBASIC19.82■□□□□ 0.76
RFWD3Q6PCD5 LINC01568-207ENST00000641790 1380 ntBASIC19.82■□□□□ 0.76
RFWD3Q6PCD5 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.82■□□□□ 0.76
RFWD3Q6PCD5 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RFWD3Q6PCD5 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RFWD3Q6PCD5 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFWD3Q6PCD5 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
RFWD3Q6PCD5 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RFWD3Q6PCD5 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.81■□□□□ 0.76
RFWD3Q6PCD5 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
RFWD3Q6PCD5 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFWD3Q6PCD5 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFWD3Q6PCD5 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
RFWD3Q6PCD5 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.81■□□□□ 0.76
RFWD3Q6PCD5 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.81■□□□□ 0.76
RFWD3Q6PCD5 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.81■□□□□ 0.76
RFWD3Q6PCD5 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.81■□□□□ 0.76
RFWD3Q6PCD5 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.81■□□□□ 0.76
RFWD3Q6PCD5 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
RFWD3Q6PCD5 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RFWD3Q6PCD5 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.81■□□□□ 0.76
RFWD3Q6PCD5 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFWD3Q6PCD5 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RFWD3Q6PCD5 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.81■□□□□ 0.76
RFWD3Q6PCD5 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFWD3Q6PCD5 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RFWD3Q6PCD5 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFWD3Q6PCD5 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFWD3Q6PCD5 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.8■□□□□ 0.76
RFWD3Q6PCD5 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
RFWD3Q6PCD5 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.8■□□□□ 0.76
RFWD3Q6PCD5 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.8■□□□□ 0.76
RFWD3Q6PCD5 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RFWD3Q6PCD5 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms