Protein–RNA interactions for Protein: Q5VXM1

CDCP2, CUB domain-containing protein 2, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP2Q5VXM1 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
CDCP2Q5VXM1 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDCP2Q5VXM1 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CDCP2Q5VXM1 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDCP2Q5VXM1 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.08■□□□□ 0.48
CDCP2Q5VXM1 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CDCP2Q5VXM1 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CDCP2Q5VXM1 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDCP2Q5VXM1 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.07■□□□□ 0.48
CDCP2Q5VXM1 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.07■□□□□ 0.48
CDCP2Q5VXM1 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDCP2Q5VXM1 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDCP2Q5VXM1 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDCP2Q5VXM1 MIR662-201ENST00000384847 95 ntBASIC18.07■□□□□ 0.48
CDCP2Q5VXM1 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CDCP2Q5VXM1 CHCHD2P8-201ENST00000429873 447 ntBASIC18.07■□□□□ 0.48
CDCP2Q5VXM1 PVRIG2P-201ENST00000435460 978 ntBASIC18.07■□□□□ 0.48
CDCP2Q5VXM1 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDCP2Q5VXM1 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.07■□□□□ 0.48
CDCP2Q5VXM1 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.07■□□□□ 0.48
CDCP2Q5VXM1 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.07■□□□□ 0.48
CDCP2Q5VXM1 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
CDCP2Q5VXM1 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CDCP2Q5VXM1 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDCP2Q5VXM1 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CDCP2Q5VXM1 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDCP2Q5VXM1 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.07■□□□□ 0.48
CDCP2Q5VXM1 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDCP2Q5VXM1 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CDCP2Q5VXM1 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDCP2Q5VXM1 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDCP2Q5VXM1 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CDCP2Q5VXM1 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.06■□□□□ 0.48
CDCP2Q5VXM1 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDCP2Q5VXM1 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDCP2Q5VXM1 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDCP2Q5VXM1 PKD1P6-201ENST00000343738 4769 ntBASIC18.06■□□□□ 0.48
CDCP2Q5VXM1 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDCP2Q5VXM1 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDCP2Q5VXM1 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.06■□□□□ 0.48
CDCP2Q5VXM1 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDCP2Q5VXM1 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDCP2Q5VXM1 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDCP2Q5VXM1 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDCP2Q5VXM1 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CDCP2Q5VXM1 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDCP2Q5VXM1 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDCP2Q5VXM1 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.06■□□□□ 0.48
CDCP2Q5VXM1 MCCD1P1-208ENST00000445732 328 ntBASIC18.06■□□□□ 0.48
CDCP2Q5VXM1 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDCP2Q5VXM1 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.06■□□□□ 0.48
CDCP2Q5VXM1 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CDCP2Q5VXM1 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.06■□□□□ 0.48
CDCP2Q5VXM1 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDCP2Q5VXM1 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDCP2Q5VXM1 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDCP2Q5VXM1 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDCP2Q5VXM1 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDCP2Q5VXM1 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDCP2Q5VXM1 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDCP2Q5VXM1 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDCP2Q5VXM1 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.05■□□□□ 0.48
CDCP2Q5VXM1 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDCP2Q5VXM1 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDCP2Q5VXM1 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDCP2Q5VXM1 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CDCP2Q5VXM1 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDCP2Q5VXM1 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.05■□□□□ 0.48
CDCP2Q5VXM1 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDCP2Q5VXM1 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.05■□□□□ 0.48
CDCP2Q5VXM1 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.05■□□□□ 0.48
CDCP2Q5VXM1 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDCP2Q5VXM1 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDCP2Q5VXM1 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDCP2Q5VXM1 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDCP2Q5VXM1 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDCP2Q5VXM1 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDCP2Q5VXM1 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDCP2Q5VXM1 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.05■□□□□ 0.48
CDCP2Q5VXM1 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.05■□□□□ 0.48
CDCP2Q5VXM1 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.05■□□□□ 0.48
CDCP2Q5VXM1 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.05■□□□□ 0.48
CDCP2Q5VXM1 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.05■□□□□ 0.48
CDCP2Q5VXM1 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.05■□□□□ 0.48
CDCP2Q5VXM1 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.05■□□□□ 0.48
CDCP2Q5VXM1 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CDCP2Q5VXM1 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.05■□□□□ 0.48
CDCP2Q5VXM1 AL157888.1-201ENST00000631930 593 ntBASIC18.05■□□□□ 0.48
CDCP2Q5VXM1 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDCP2Q5VXM1 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDCP2Q5VXM1 SLC25A24-204ENST00000569674 2357 ntBASIC18.05■□□□□ 0.48
CDCP2Q5VXM1 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDCP2Q5VXM1 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.05■□□□□ 0.48
CDCP2Q5VXM1 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CDCP2Q5VXM1 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDCP2Q5VXM1 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.04■□□□□ 0.48
CDCP2Q5VXM1 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDCP2Q5VXM1 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.04■□□□□ 0.48
CDCP2Q5VXM1 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDCP2Q5VXM1 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms