Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC21.86■■□□□ 1.09
USH1GQ495M9 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
USH1GQ495M9 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
USH1GQ495M9 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
USH1GQ495M9 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
USH1GQ495M9 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC21.86■■□□□ 1.09
USH1GQ495M9 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC21.86■■□□□ 1.09
USH1GQ495M9 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC21.86■■□□□ 1.09
USH1GQ495M9 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
USH1GQ495M9 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC21.86■■□□□ 1.09
USH1GQ495M9 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC21.86■■□□□ 1.09
USH1GQ495M9 NTF6B-201ENST00000591913 560 ntBASIC21.86■■□□□ 1.09
USH1GQ495M9 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC21.86■■□□□ 1.09
USH1GQ495M9 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
USH1GQ495M9 AC007952.6-201ENST00000573168 2673 ntBASIC21.86■■□□□ 1.09
USH1GQ495M9 AC003957.1-201ENST00000625108 2673 ntBASIC21.86■■□□□ 1.09
USH1GQ495M9 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
USH1GQ495M9 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
USH1GQ495M9 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
USH1GQ495M9 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC21.86■■□□□ 1.09
USH1GQ495M9 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.86■■□□□ 1.09
USH1GQ495M9 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
USH1GQ495M9 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
USH1GQ495M9 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.85■■□□□ 1.09
USH1GQ495M9 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC21.85■■□□□ 1.09
USH1GQ495M9 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC21.85■■□□□ 1.09
USH1GQ495M9 TEX21P-204ENST00000641479 1693 ntBASIC21.85■■□□□ 1.09
USH1GQ495M9 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.85■■□□□ 1.09
USH1GQ495M9 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC21.85■■□□□ 1.09
USH1GQ495M9 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
USH1GQ495M9 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC21.85■■□□□ 1.09
USH1GQ495M9 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
USH1GQ495M9 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
USH1GQ495M9 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
USH1GQ495M9 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
USH1GQ495M9 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
USH1GQ495M9 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
USH1GQ495M9 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
USH1GQ495M9 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
USH1GQ495M9 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC21.85■■□□□ 1.09
USH1GQ495M9 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
USH1GQ495M9 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
USH1GQ495M9 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
USH1GQ495M9 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
USH1GQ495M9 AC008622.2-201ENST00000617006 1229 ntBASIC21.85■■□□□ 1.09
USH1GQ495M9 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
USH1GQ495M9 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
USH1GQ495M9 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
USH1GQ495M9 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
USH1GQ495M9 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
USH1GQ495M9 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
USH1GQ495M9 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
USH1GQ495M9 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
USH1GQ495M9 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
USH1GQ495M9 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
USH1GQ495M9 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
USH1GQ495M9 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.84■■□□□ 1.09
USH1GQ495M9 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
USH1GQ495M9 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
USH1GQ495M9 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
USH1GQ495M9 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
USH1GQ495M9 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
USH1GQ495M9 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
USH1GQ495M9 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
USH1GQ495M9 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
USH1GQ495M9 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC21.84■■□□□ 1.09
USH1GQ495M9 COX11P1-201ENST00000489116 835 ntBASIC21.84■■□□□ 1.09
USH1GQ495M9 YBX1P2-201ENST00000489612 999 ntBASIC21.84■■□□□ 1.09
USH1GQ495M9 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
USH1GQ495M9 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC21.84■■□□□ 1.09
USH1GQ495M9 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC21.84■■□□□ 1.09
USH1GQ495M9 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC21.84■■□□□ 1.09
USH1GQ495M9 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.83■■□□□ 1.09
USH1GQ495M9 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
USH1GQ495M9 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.83■■□□□ 1.09
USH1GQ495M9 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
USH1GQ495M9 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
USH1GQ495M9 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
USH1GQ495M9 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC21.83■■□□□ 1.09
USH1GQ495M9 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
USH1GQ495M9 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
USH1GQ495M9 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC21.83■■□□□ 1.09
USH1GQ495M9 NT5C-211ENST00000582170 653 ntTSL 3 BASIC21.83■■□□□ 1.09
USH1GQ495M9 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
USH1GQ495M9 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC21.83■■□□□ 1.09
USH1GQ495M9 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
USH1GQ495M9 AL023973.1-201ENST00000624619 620 ntBASIC21.83■■□□□ 1.09
USH1GQ495M9 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
USH1GQ495M9 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
USH1GQ495M9 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC21.83■■□□□ 1.09
USH1GQ495M9 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
USH1GQ495M9 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
USH1GQ495M9 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
USH1GQ495M9 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
USH1GQ495M9 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
USH1GQ495M9 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.83■■□□□ 1.08
USH1GQ495M9 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC21.82■■□□□ 1.08
USH1GQ495M9 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.82■■□□□ 1.08
USH1GQ495M9 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
USH1GQ495M9 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms