Protein–RNA interactions for Protein: Q01804

OTUD4, OTU domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4Q01804 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
OTUD4Q01804 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
OTUD4Q01804 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
OTUD4Q01804 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
OTUD4Q01804 KRT8P41-201ENST00000533985 1514 ntBASIC19.67■□□□□ 0.74
OTUD4Q01804 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
OTUD4Q01804 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
OTUD4Q01804 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.67■□□□□ 0.74
OTUD4Q01804 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
OTUD4Q01804 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
OTUD4Q01804 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
OTUD4Q01804 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.67■□□□□ 0.74
OTUD4Q01804 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.67■□□□□ 0.74
OTUD4Q01804 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
OTUD4Q01804 KRT16P5-201ENST00000455284 522 ntBASIC19.67■□□□□ 0.74
OTUD4Q01804 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
OTUD4Q01804 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.67■□□□□ 0.74
OTUD4Q01804 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.67■□□□□ 0.74
OTUD4Q01804 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
OTUD4Q01804 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
OTUD4Q01804 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
OTUD4Q01804 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
OTUD4Q01804 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
OTUD4Q01804 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
OTUD4Q01804 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
OTUD4Q01804 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
OTUD4Q01804 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
OTUD4Q01804 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
OTUD4Q01804 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
OTUD4Q01804 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
OTUD4Q01804 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.66■□□□□ 0.74
OTUD4Q01804 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.66■□□□□ 0.74
OTUD4Q01804 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.66■□□□□ 0.74
OTUD4Q01804 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.66■□□□□ 0.74
OTUD4Q01804 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
OTUD4Q01804 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
OTUD4Q01804 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.66■□□□□ 0.74
OTUD4Q01804 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.66■□□□□ 0.74
OTUD4Q01804 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.66■□□□□ 0.74
OTUD4Q01804 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
OTUD4Q01804 AC124016.1-201ENST00000609552 612 ntBASIC19.66■□□□□ 0.74
OTUD4Q01804 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
OTUD4Q01804 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.66■□□□□ 0.74
OTUD4Q01804 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
OTUD4Q01804 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
OTUD4Q01804 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.66■□□□□ 0.74
OTUD4Q01804 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
OTUD4Q01804 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
OTUD4Q01804 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
OTUD4Q01804 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
OTUD4Q01804 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.65■□□□□ 0.74
OTUD4Q01804 WIZP1-201ENST00000531444 2299 ntBASIC19.65■□□□□ 0.74
OTUD4Q01804 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
OTUD4Q01804 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
OTUD4Q01804 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
OTUD4Q01804 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
OTUD4Q01804 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
OTUD4Q01804 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
OTUD4Q01804 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.65■□□□□ 0.74
OTUD4Q01804 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.65■□□□□ 0.74
OTUD4Q01804 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
OTUD4Q01804 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
OTUD4Q01804 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
OTUD4Q01804 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
OTUD4Q01804 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.65■□□□□ 0.74
OTUD4Q01804 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.65■□□□□ 0.74
OTUD4Q01804 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
OTUD4Q01804 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
OTUD4Q01804 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.65■□□□□ 0.74
OTUD4Q01804 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
OTUD4Q01804 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.65■□□□□ 0.74
OTUD4Q01804 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.65■□□□□ 0.74
OTUD4Q01804 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
OTUD4Q01804 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
OTUD4Q01804 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.65■□□□□ 0.74
OTUD4Q01804 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
OTUD4Q01804 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
OTUD4Q01804 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
OTUD4Q01804 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
OTUD4Q01804 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
OTUD4Q01804 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
OTUD4Q01804 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
OTUD4Q01804 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
OTUD4Q01804 AC009113.1-201ENST00000570267 2443 ntBASIC19.64■□□□□ 0.74
OTUD4Q01804 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
OTUD4Q01804 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
OTUD4Q01804 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
OTUD4Q01804 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
OTUD4Q01804 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.64■□□□□ 0.73
OTUD4Q01804 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
OTUD4Q01804 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
OTUD4Q01804 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.64■□□□□ 0.73
OTUD4Q01804 AC073648.6-201ENST00000641589 218 ntBASIC19.64■□□□□ 0.73
OTUD4Q01804 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
OTUD4Q01804 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
OTUD4Q01804 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.64■□□□□ 0.73
OTUD4Q01804 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.64■□□□□ 0.73
OTUD4Q01804 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.64■□□□□ 0.73
OTUD4Q01804 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
OTUD4Q01804 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms