Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HMGCS1Q01581 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMGCS1Q01581 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.35■□□□□ 0.53
HMGCS1Q01581 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMGCS1Q01581 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
HMGCS1Q01581 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.35■□□□□ 0.53
HMGCS1Q01581 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HMGCS1Q01581 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.35■□□□□ 0.53
HMGCS1Q01581 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.35■□□□□ 0.53
HMGCS1Q01581 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HMGCS1Q01581 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.35■□□□□ 0.53
HMGCS1Q01581 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.35■□□□□ 0.53
HMGCS1Q01581 KRASP1-201ENST00000407852 552 ntBASIC18.35■□□□□ 0.53
HMGCS1Q01581 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.35■□□□□ 0.53
HMGCS1Q01581 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.35■□□□□ 0.53
HMGCS1Q01581 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.35■□□□□ 0.53
HMGCS1Q01581 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HMGCS1Q01581 MIR4651-201ENST00000582622 73 ntBASIC18.35■□□□□ 0.53
HMGCS1Q01581 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMGCS1Q01581 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMGCS1Q01581 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMGCS1Q01581 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMGCS1Q01581 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMGCS1Q01581 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMGCS1Q01581 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMGCS1Q01581 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMGCS1Q01581 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.35■□□□□ 0.53
HMGCS1Q01581 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMGCS1Q01581 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMGCS1Q01581 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.35■□□□□ 0.53
HMGCS1Q01581 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
HMGCS1Q01581 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
HMGCS1Q01581 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGCS1Q01581 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGCS1Q01581 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGCS1Q01581 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
HMGCS1Q01581 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGCS1Q01581 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGCS1Q01581 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
HMGCS1Q01581 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.34■□□□□ 0.53
HMGCS1Q01581 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGCS1Q01581 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGCS1Q01581 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
HMGCS1Q01581 ESRRAP1-201ENST00000400596 1257 ntBASIC18.34■□□□□ 0.53
HMGCS1Q01581 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.34■□□□□ 0.53
HMGCS1Q01581 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.34■□□□□ 0.53
HMGCS1Q01581 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
HMGCS1Q01581 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.34■□□□□ 0.53
HMGCS1Q01581 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HMGCS1Q01581 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.34■□□□□ 0.53
HMGCS1Q01581 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGCS1Q01581 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.34■□□□□ 0.53
HMGCS1Q01581 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGCS1Q01581 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.34■□□□□ 0.53
HMGCS1Q01581 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGCS1Q01581 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGCS1Q01581 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGCS1Q01581 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGCS1Q01581 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGCS1Q01581 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.34■□□□□ 0.53
HMGCS1Q01581 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGCS1Q01581 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGCS1Q01581 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
HMGCS1Q01581 AL512353.2-201ENST00000448759 1962 ntBASIC18.33■□□□□ 0.53
HMGCS1Q01581 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HMGCS1Q01581 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
HMGCS1Q01581 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HMGCS1Q01581 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HMGCS1Q01581 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
HMGCS1Q01581 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.33■□□□□ 0.53
HMGCS1Q01581 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.33■□□□□ 0.53
HMGCS1Q01581 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
HMGCS1Q01581 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.33■□□□□ 0.53
HMGCS1Q01581 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.33■□□□□ 0.53
HMGCS1Q01581 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.33■□□□□ 0.52
HMGCS1Q01581 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HMGCS1Q01581 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
HMGCS1Q01581 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HMGCS1Q01581 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
HMGCS1Q01581 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HMGCS1Q01581 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
HMGCS1Q01581 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
HMGCS1Q01581 AC239809.2-201ENST00000415381 517 ntBASIC18.33■□□□□ 0.52
HMGCS1Q01581 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.33■□□□□ 0.52
HMGCS1Q01581 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.33■□□□□ 0.52
HMGCS1Q01581 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
HMGCS1Q01581 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
HMGCS1Q01581 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HMGCS1Q01581 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
HMGCS1Q01581 AC009113.1-201ENST00000570267 2443 ntBASIC18.33■□□□□ 0.52
HMGCS1Q01581 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
HMGCS1Q01581 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
HMGCS1Q01581 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HMGCS1Q01581 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HMGCS1Q01581 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMGCS1Q01581 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMGCS1Q01581 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMGCS1Q01581 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMGCS1Q01581 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
HMGCS1Q01581 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms