Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
IRX4P78413 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.77■□□□□ 0.76
IRX4P78413 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.77■□□□□ 0.76
IRX4P78413 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.77■□□□□ 0.76
IRX4P78413 SLC25A3P1-201ENST00000443844 931 ntBASIC19.77■□□□□ 0.76
IRX4P78413 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.77■□□□□ 0.76
IRX4P78413 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.77■□□□□ 0.76
IRX4P78413 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
IRX4P78413 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
IRX4P78413 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
IRX4P78413 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
IRX4P78413 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
IRX4P78413 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
IRX4P78413 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
IRX4P78413 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
IRX4P78413 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
IRX4P78413 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
IRX4P78413 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
IRX4P78413 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
IRX4P78413 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
IRX4P78413 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.76■□□□□ 0.75
IRX4P78413 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.76■□□□□ 0.75
IRX4P78413 AC116562.2-201ENST00000507042 360 ntBASIC19.76■□□□□ 0.75
IRX4P78413 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
IRX4P78413 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.76■□□□□ 0.75
IRX4P78413 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.76■□□□□ 0.75
IRX4P78413 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.76■□□□□ 0.75
IRX4P78413 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
IRX4P78413 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.76■□□□□ 0.75
IRX4P78413 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
IRX4P78413 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
IRX4P78413 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
IRX4P78413 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.76■□□□□ 0.75
IRX4P78413 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
IRX4P78413 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
IRX4P78413 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
IRX4P78413 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
IRX4P78413 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
IRX4P78413 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
IRX4P78413 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.75■□□□□ 0.75
IRX4P78413 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
IRX4P78413 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
IRX4P78413 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.75■□□□□ 0.75
IRX4P78413 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
IRX4P78413 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
IRX4P78413 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
IRX4P78413 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
IRX4P78413 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
IRX4P78413 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
IRX4P78413 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.75■□□□□ 0.75
IRX4P78413 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.75■□□□□ 0.75
IRX4P78413 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.75■□□□□ 0.75
IRX4P78413 AC087388.1-201ENST00000571370 1112 ntBASIC19.75■□□□□ 0.75
IRX4P78413 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.75■□□□□ 0.75
IRX4P78413 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.75■□□□□ 0.75
IRX4P78413 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
IRX4P78413 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.75■□□□□ 0.75
IRX4P78413 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
IRX4P78413 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
IRX4P78413 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
IRX4P78413 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
IRX4P78413 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.75■□□□□ 0.75
IRX4P78413 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
IRX4P78413 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.75■□□□□ 0.75
IRX4P78413 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.75■□□□□ 0.75
IRX4P78413 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
IRX4P78413 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
IRX4P78413 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
IRX4P78413 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
IRX4P78413 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.74■□□□□ 0.75
IRX4P78413 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
IRX4P78413 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
IRX4P78413 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.74■□□□□ 0.75
IRX4P78413 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.74■□□□□ 0.75
IRX4P78413 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
IRX4P78413 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.74■□□□□ 0.75
IRX4P78413 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.74■□□□□ 0.75
IRX4P78413 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.74■□□□□ 0.75
IRX4P78413 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
IRX4P78413 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
IRX4P78413 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
IRX4P78413 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
IRX4P78413 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
IRX4P78413 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
IRX4P78413 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
IRX4P78413 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
IRX4P78413 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
IRX4P78413 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
IRX4P78413 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
IRX4P78413 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
IRX4P78413 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
IRX4P78413 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
IRX4P78413 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
IRX4P78413 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
IRX4P78413 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
IRX4P78413 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
IRX4P78413 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
IRX4P78413 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
IRX4P78413 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
IRX4P78413 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms