Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLRN1P58418 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CLRN1P58418 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CLRN1P58418 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
CLRN1P58418 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CLRN1P58418 FP475955.4-201ENST00000623131 1990 ntBASIC17.02■□□□□ 0.31
CLRN1P58418 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLRN1P58418 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLRN1P58418 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CLRN1P58418 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLRN1P58418 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLRN1P58418 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLRN1P58418 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLRN1P58418 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLRN1P58418 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.01■□□□□ 0.31
CLRN1P58418 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLRN1P58418 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CLRN1P58418 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLRN1P58418 IRX1P1-201ENST00000438849 1838 ntBASIC17.01■□□□□ 0.31
CLRN1P58418 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLRN1P58418 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.01■□□□□ 0.31
CLRN1P58418 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CLRN1P58418 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLRN1P58418 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLRN1P58418 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CLRN1P58418 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLRN1P58418 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.01■□□□□ 0.31
CLRN1P58418 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.01■□□□□ 0.31
CLRN1P58418 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.01■□□□□ 0.31
CLRN1P58418 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
CLRN1P58418 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.01■□□□□ 0.31
CLRN1P58418 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.01■□□□□ 0.31
CLRN1P58418 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.01■□□□□ 0.31
CLRN1P58418 AL445675.2-201ENST00000620291 557 ntBASIC17.01■□□□□ 0.31
CLRN1P58418 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.01■□□□□ 0.31
CLRN1P58418 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLRN1P58418 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLRN1P58418 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLRN1P58418 AL049812.1-201ENST00000432563 2267 ntBASIC17.01■□□□□ 0.31
CLRN1P58418 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLRN1P58418 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CLRN1P58418 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLRN1P58418 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.01■□□□□ 0.31
CLRN1P58418 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLRN1P58418 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CLRN1P58418 TNXA-203ENST00000507684 2038 ntBASIC17.01■□□□□ 0.31
CLRN1P58418 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLRN1P58418 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLRN1P58418 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLRN1P58418 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CLRN1P58418 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CLRN1P58418 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CLRN1P58418 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
CLRN1P58418 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLRN1P58418 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLRN1P58418 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17■□□□□ 0.31
CLRN1P58418 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17■□□□□ 0.31
CLRN1P58418 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17■□□□□ 0.31
CLRN1P58418 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLRN1P58418 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLRN1P58418 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CLRN1P58418 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17■□□□□ 0.31
CLRN1P58418 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLRN1P58418 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17■□□□□ 0.31
CLRN1P58418 AC142381.4-202ENST00000563973 229 ntBASIC17■□□□□ 0.31
CLRN1P58418 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
CLRN1P58418 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLRN1P58418 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17■□□□□ 0.31
CLRN1P58418 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CLRN1P58418 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17■□□□□ 0.31
CLRN1P58418 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLRN1P58418 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17■□□□□ 0.31
CLRN1P58418 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLRN1P58418 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLRN1P58418 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CLRN1P58418 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CLRN1P58418 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLRN1P58418 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLRN1P58418 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17■□□□□ 0.31
CLRN1P58418 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLRN1P58418 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CLRN1P58418 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLRN1P58418 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.99■□□□□ 0.31
CLRN1P58418 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CLRN1P58418 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CLRN1P58418 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CLRN1P58418 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLRN1P58418 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
CLRN1P58418 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLRN1P58418 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.99■□□□□ 0.31
CLRN1P58418 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.99■□□□□ 0.31
CLRN1P58418 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CLRN1P58418 PRORSD1P-201ENST00000295112 541 ntBASIC16.99■□□□□ 0.31
CLRN1P58418 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLRN1P58418 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CLRN1P58418 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CLRN1P58418 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CLRN1P58418 KSR1P1-201ENST00000446298 240 ntBASIC16.99■□□□□ 0.31
CLRN1P58418 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.99■□□□□ 0.31
CLRN1P58418 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms