Protein–RNA interactions for Protein: P53999

SUB1, Activated RNA polymerase II transcriptional coactivator p15, humanhuman

Known RBP eCLIP

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P53999 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.672e-7■■□□□ 13.3
SUB1P53999 RPL5-204ENST00000470843 694 ntTSL 33.21□□□□□ -1.94e-12■■□□□ 13.2
SUB1P53999 RBM3-201ENST00000354480 1884 ntTSL 2 BASIC10.22□□□□□ -0.771e-11■■□□□ 13.2
SUB1P53999 PRAME-203ENST00000402697 2057 ntAPPRIS P2 TSL 5 BASIC10.62□□□□□ -0.716e-69■■□□□ 13.2
SUB1P53999 PCBP2-203ENST00000437231 3026 ntAPPRIS ALT1 TSL 5 BASIC8.51□□□□□ -1.051e-6■■□□□ 13.2
SUB1P53999 PCBP2-205ENST00000447282 3077 ntTSL 5 BASIC8.31□□□□□ -1.081e-6■■□□□ 13.2
SUB1P53999 PCBP2-210ENST00000547859 1919 ntTSL 28.24□□□□□ -1.091e-6■■□□□ 13.2
SUB1P53999 PCBP2-206ENST00000455667 2741 ntAPPRIS ALT1 TSL 1 (best) BASIC7.3□□□□□ -1.241e-6■■□□□ 13.2
SUB1P53999 ACTB-208ENST00000464611 715 ntTSL 57.01□□□□□ -1.299e-20■■□□□ 13.2
SUB1P53999 PSMB7-202ENST00000441097 650 ntTSL 55.65□□□□□ -1.55e-8■■□□□ 13.2
SUB1P53999 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC18.94■□□□□ 0.627e-7■■□□□ 13.2
SUB1P53999 RPS20-210ENST00000523936 899 ntTSL 2 BASIC14.14□□□□□ -0.157e-7■■□□□ 13.2
SUB1P53999 RPS20-208ENST00000521262 650 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.827e-7■■□□□ 13.2
SUB1P53999 RPS20-212ENST00000618656 627 ntTSL 3 BASIC7.21□□□□□ -1.267e-7■■□□□ 13.2
SUB1P53999 RPS20-207ENST00000520627 423 ntTSL 5 BASIC7□□□□□ -1.297e-7■■□□□ 13.2
SUB1P53999 RPS20-201ENST00000009589 626 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.397e-7■■□□□ 13.2
SUB1P53999 RPS20-204ENST00000519606 424 ntTSL 3 BASIC6.35□□□□□ -1.397e-7■■□□□ 13.2
SUB1P53999 RPS20-206ENST00000520490 402 ntTSL 36.34□□□□□ -1.397e-7■■□□□ 13.2
SUB1P53999 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC5.98□□□□□ -1.457e-7■■□□□ 13.2
SUB1P53999 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.6■□□□□ 0.574e-12■■□□□ 13.2
SUB1P53999 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.144e-12■■□□□ 13.2
SUB1P53999 RPS4X-201ENST00000316084 1526 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.325e-7■■□□□ 13.2
SUB1P53999 RPS4X-204ENST00000486733 1820 ntTSL 56.37□□□□□ -1.395e-7■■□□□ 13.2
SUB1P53999 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC14.64□□□□□ -0.076e-7■■□□□ 13.2
SUB1P53999 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.136e-7■■□□□ 13.2
SUB1P53999 MSI2-215ENST00000582453 496 ntTSL 32.2□□□□□ -2.066e-7■■□□□ 13.2
SUB1P53999 PHB-209ENST00000508009 451 ntTSL 55.67□□□□□ -1.52e-6■■□□□ 13.2
SUB1P53999 ANK1-209ENST00000520299 3587 ntTSL 27.71□□□□□ -1.173e-6■■□□□ 13.2
SUB1P53999 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.133e-8■■□□□ 13.2
SUB1P53999 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC12.98□□□□□ -0.333e-8■■□□□ 13.2
SUB1P53999 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC12.51□□□□□ -0.413e-8■■□□□ 13.2
SUB1P53999 AK2-206ENST00000480134 811 ntTSL 2 BASIC9.76□□□□□ -0.853e-8■■□□□ 13.2
SUB1P53999 AK2-209ENST00000491241 596 ntTSL 38.98□□□□□ -0.973e-8■■□□□ 13.2
SUB1P53999 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.051e-7■■□□□ 13.1
SUB1P53999 PLK1-202ENST00000562272 4135 ntTSL 210.19□□□□□ -0.781e-7■■□□□ 13.1
SUB1P53999 FLNA-214ENST00000474072 430 ntTSL 212.78□□□□□ -0.361e-15■■□□□ 13.1
SUB1P53999 PPP1CC-204ENST00000546933 2154 ntTSL 3 BASIC9.43□□□□□ -0.92e-10■■□□□ 13.1
SUB1P53999 RPS27A-209ENST00000494756 535 ntTSL 27.45□□□□□ -1.222e-25■■□□□ 13.1
SUB1P53999 RPS27A-207ENST00000471772 557 ntTSL 26.14□□□□□ -1.432e-25■■□□□ 13.1
SUB1P53999 SLC25A6-202ENST00000475167 900 ntTSL 212.51□□□□□ -0.415e-7■■□□□ 13.1
SUB1P53999 SLC25A6-203ENST00000484026 854 ntTSL 59.92□□□□□ -0.825e-7■■□□□ 13.1
SUB1P53999 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.23e-7■■□□□ 13.1
SUB1P53999 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.083e-8■■□□□ 13.1
SUB1P53999 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC15.46■□□□□ 0.073e-8■■□□□ 13.1
SUB1P53999 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC15.21■□□□□ 0.033e-8■■□□□ 13.1
SUB1P53999 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.093e-8■■□□□ 13.1
SUB1P53999 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.223e-8■■□□□ 13.1
SUB1P53999 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.253e-8■■□□□ 13.1
SUB1P53999 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.333e-8■■□□□ 13.1
SUB1P53999 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.343e-8■■□□□ 13.1
SUB1P53999 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.343e-8■■□□□ 13.1
SUB1P53999 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC11.86□□□□□ -0.513e-8■■□□□ 13.1
SUB1P53999 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.553e-8■■□□□ 13.1
SUB1P53999 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC11.33□□□□□ -0.63e-8■■□□□ 13.1
SUB1P53999 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.933e-8■■□□□ 13.1
SUB1P53999 ANAPC11-205ENST00000571570 581 ntAPPRIS P1 TSL 3 BASIC7.46□□□□□ -1.223e-8■■□□□ 13.1
SUB1P53999 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.112e-8■■□□□ 13.1
SUB1P53999 SET-204ENST00000372692 2850 ntTSL 1 (best) BASIC8.07□□□□□ -1.122e-8■■□□□ 13.1
SUB1P53999 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.031e-8■■□□□ 13
SUB1P53999 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.221e-8■■□□□ 13
SUB1P53999 SLC39A7-204ENST00000463972 1410 ntTSL 210.7□□□□□ -0.71e-8■■□□□ 13
SUB1P53999 AARS-206ENST00000569790 528 ntTSL 55.33□□□□□ -1.561e-8■■□□□ 13
SUB1P53999 PRMT1-205ENST00000525915 298 ntTSL 32.39□□□□□ -2.031e-8■■□□□ 13
SUB1P53999 HSPA8-211ENST00000527983 1509 ntTSL 1 (best)9.1□□□□□ -0.952e-7■■□□□ 13
SUB1P53999 GAS5-225ENST00000454813 621 ntTSL 34.89□□□□□ -1.635e-17■■□□□ 13
SUB1P53999 GAS5-207ENST00000422207 643 ntTSL 24.06□□□□□ -1.765e-17■■□□□ 13
SUB1P53999 GAS5-217ENST00000444470 424 ntTSL 24.06□□□□□ -1.765e-17■■□□□ 13
SUB1P53999 GAS5-212ENST00000434796 575 ntTSL 20.73□□□□□ -2.295e-17■■□□□ 13
SUB1P53999 TKT-205ENST00000460243 615 ntTSL 27.84□□□□□ -1.152e-6■■□□□ 13
SUB1P53999 MSI2-214ENST00000581776 493 ntTSL 23.7□□□□□ -1.829e-7■■□□□ 13
SUB1P53999 MSI2-213ENST00000581523 534 ntTSL 23.03□□□□□ -1.929e-7■■□□□ 13
SUB1P53999 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -01e-8■■□□□ 13
SUB1P53999 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC12.79□□□□□ -0.361e-8■■□□□ 13
SUB1P53999 SRSF2-204ENST00000452355 1357 ntTSL 512.03□□□□□ -0.481e-8■■□□□ 13
SUB1P53999 SRSF2-208ENST00000585202 1359 ntTSL 311.77□□□□□ -0.531e-8■■□□□ 13
SUB1P53999 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.561e-8■■□□□ 13
SUB1P53999 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.49e-11■■□□□ 13
SUB1P53999 PPP5C-213ENST00000527623 1215 ntTSL 216■□□□□ 0.159e-11■■□□□ 13
SUB1P53999 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC16■□□□□ 0.159e-11■■□□□ 13
SUB1P53999 PPP5C-211ENST00000525507 1300 ntTSL 214.7□□□□□ -0.069e-11■■□□□ 13
SUB1P53999 PPP5C-206ENST00000486994 2209 ntTSL 213.56□□□□□ -0.249e-11■■□□□ 13
SUB1P53999 PPP5C-207ENST00000487483 4675 ntTSL 513.05□□□□□ -0.329e-11■■□□□ 13
SUB1P53999 PPP5C-205ENST00000478046 1886 ntTSL 1 (best)11.7□□□□□ -0.549e-11■■□□□ 13
SUB1P53999 GANAB-208ENST00000528503 608 ntTSL 29.53□□□□□ -0.882e-8■■□□□ 13
SUB1P53999 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.695e-8■■□□□ 13
SUB1P53999 POMP-202ENST00000460403 1428 ntTSL 3 BASIC2.97□□□□□ -1.935e-8■■□□□ 13
SUB1P53999 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.62e-36■■□□□ 13
SUB1P53999 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.622e-36■■□□□ 13
SUB1P53999 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.632e-36■■□□□ 13
SUB1P53999 PRAME-201ENST00000398741 2202 ntAPPRIS P2 TSL 5 BASIC10.62□□□□□ -0.712e-36■■□□□ 13
SUB1P53999 PRAME-213ENST00000492657 2831 ntTSL 1 (best)10.29□□□□□ -0.762e-36■■□□□ 13
SUB1P53999 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.045e-9■■□□□ 13
SUB1P53999 VARS-221ENST00000463184 619 ntTSL 214.44□□□□□ -0.11e-8■■□□□ 13
SUB1P53999 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC13.54□□□□□ -0.241e-8■■□□□ 13
SUB1P53999 RIPOR3-203ENST00000462493 2698 ntTSL 212.97□□□□□ -0.331e-8■■□□□ 13
SUB1P53999 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.41e-8■■□□□ 13
SUB1P53999 BANF1-203ENST00000524628 612 ntTSL 211.91□□□□□ -0.53e-13■■□□□ 13
SUB1P53999 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.543e-13■■□□□ 13
SUB1P53999 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.773e-13■■□□□ 13
SUB1P53999 RIPOR3-201ENST00000045083 4279 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.851e-8■■□□□ 13
Retrieved 100 of 11,644 protein–RNA pairs in 98.9 ms