RNA–Protein interactions for RNA: ENST00000581523.5

MSI2-213, Transcript of musashi RNA binding protein 2, humanhuman

TSL 2

Gene MSI2, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-213ENST00000581523 CHIC1Q5VXU3 224 aa16.24■□□□□ 0.19
MSI2-213ENST00000581523 AEBP2Q6ZN18 517 aaPredicted RBP16.14■□□□□ 0.17
MSI2-213ENST00000581523 PHF23Q9BUL5 403 aaPredicted RBP14.33□□□□□ -0.12
MSI2-213ENST00000581523 SENP3Q9H4L4 574 aaPredicted RBP13.63□□□□□ -0.23
MSI2-213ENST00000581523 PLPPR3Q6T4P5 718 aa13.39□□□□□ -0.27
MSI2-213ENST00000581523 FOXD1Q16676 465 aa12.59□□□□□ -0.39
MSI2-213ENST00000581523 ADRA2BP18089 450 aa12.51□□□□□ -0.41
MSI2-213ENST00000581523 PPP6R1Q9UPN7 881 aa12.49□□□□□ -0.41
MSI2-213ENST00000581523 KCNA4P22459 653 aa12.09□□□□□ -0.47
MSI2-213ENST00000581523 PIAS4Q8N2W9 510 aaPredicted RBP11.96□□□□□ -0.49
MSI2-213ENST00000581523 PPP4R3CPQ6ZMV5 832 aa11.85□□□□□ -0.51
MSI2-213ENST00000581523 EHMT2Q96KQ7 1210 aa11.76□□□□□ -0.53
MSI2-213ENST00000581523 POTEDQ86YR6 584 aa11.74□□□□□ -0.53
MSI2-213ENST00000581523 NCBP3Q53F19 620 aaKnown RBP11.68□□□□□ -0.54
MSI2-213ENST00000581523 SLC4A1APQ9BWU0 796 aaKnown RBP11.6□□□□□ -0.55
MSI2-213ENST00000581523 NPM3O75607 178 aaKnown RBP11.5□□□□□ -0.57
MSI2-213ENST00000581523 CSRNP3Q8WYN3 585 aa11.47□□□□□ -0.57
MSI2-213ENST00000581523 SCAF1Q9H7N4 1312 aaKnown RBP11.44□□□□□ -0.58
MSI2-213ENST00000581523 MSH5O43196 834 aa11.43□□□□□ -0.58
MSI2-213ENST00000581523 CNKSR2Q8WXI2 1034 aa11.43□□□□□ -0.58
MSI2-213ENST00000581523 MAPK8IP2Q13387 824 aaPredicted RBP11.19□□□□□ -0.62
MSI2-213ENST00000581523 DNAJC5BQ9UF47 199 aa11.19□□□□□ -0.62
MSI2-213ENST00000581523 ZBTB22O15209 634 aa11.15□□□□□ -0.62
MSI2-213ENST00000581523 RNF216Q9NWF9 866 aaPredicted RBP11.09□□□□□ -0.63
MSI2-213ENST00000581523 FOXD4L1Q9NU39 408 aa11□□□□□ -0.65
MSI2-213ENST00000581523 DMRT2Q9Y5R5 561 aa10.96□□□□□ -0.65
MSI2-213ENST00000581523 HOXD11P31277 338 aaPredicted RBP10.94□□□□□ -0.66
MSI2-213ENST00000581523 SLC4A2P04920 1241 aa10.76□□□□□ -0.69
MSI2-213ENST00000581523 MYCNP04198 464 aaPredicted RBP10.62□□□□□ -0.71
MSI2-213ENST00000581523 ATXN8OSP0DMR3 200 aa10.62□□□□□ -0.71
MSI2-213ENST00000581523 NISCHQ9Y2I1 1504 aa10.62□□□□□ -0.71
MSI2-213ENST00000581523 DCAF8L1A6NGE4 600 aa10.39□□□□□ -0.75
MSI2-213ENST00000581523 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.37□□□□□ -0.75
MSI2-213ENST00000581523 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.32□□□□□ -0.76
MSI2-213ENST00000581523 HNRNPUL2Q1KMD3 747 aaKnown RBP10.32□□□□□ -0.76
MSI2-213ENST00000581523 FKBP8Q14318 412 aa10.3□□□□□ -0.76
MSI2-213ENST00000581523 SAMD1Q6SPF0 538 aaPredicted RBP10.3□□□□□ -0.76
MSI2-213ENST00000581523 ATF5Q9Y2D1 282 aaPredicted RBP10.29□□□□□ -0.76
MSI2-213ENST00000581523 U3KPZ7 1027 aaPredicted RBP10.27□□□□□ -0.77
MSI2-213ENST00000581523 AMER1Q5JTC6 1135 aaPredicted RBP10.24□□□□□ -0.77
MSI2-213ENST00000581523 RTN4Q9NQC3 1192 aaKnown RBP10.21□□□□□ -0.77
MSI2-213ENST00000581523 APLP2Q06481 763 aa10.1□□□□□ -0.79
MSI2-213ENST00000581523 ZNF219Q9P2Y4 722 aaPredicted RBP10.09□□□□□ -0.79
MSI2-213ENST00000581523 SLC24A1O60721 1099 aa9.98□□□□□ -0.81
MSI2-213ENST00000581523 MKRN4PQ13434 485 aaPredicted RBP9.88□□□□□ -0.83
MSI2-213ENST00000581523 SPDYE4A6NLX3 237 aa9.87□□□□□ -0.83
MSI2-213ENST00000581523 RNF39Q9H2S5 420 aa9.85□□□□□ -0.83
MSI2-213ENST00000581523 FBXO3Q9UK99 471 aa9.85□□□□□ -0.83
MSI2-213ENST00000581523 SPINK5Q9NQ38 1064 aaPredicted RBP9.84□□□□□ -0.83
MSI2-213ENST00000581523 FBLN2P98095 1184 aa9.83□□□□□ -0.84
MSI2-213ENST00000581523 PROM2Q8N271 834 aa9.83□□□□□ -0.84
MSI2-213ENST00000581523 TRHP20396 242 aaPredicted RBP9.82□□□□□ -0.84
MSI2-213ENST00000581523 POLA2Q14181 598 aa9.8□□□□□ -0.84
MSI2-213ENST00000581523 CAPN15O75808 1086 aa9.76□□□□□ -0.85
MSI2-213ENST00000581523 C1QBPQ07021 282 aaKnown RBP9.76□□□□□ -0.85
MSI2-213ENST00000581523 VASPP50552 380 aaPredicted RBP9.69□□□□□ -0.86
MSI2-213ENST00000581523 ZBTB12Q9Y330 459 aaPredicted RBP9.69□□□□□ -0.86
MSI2-213ENST00000581523 ABCB7O75027 752 aa9.6□□□□□ -0.87
MSI2-213ENST00000581523 CACNB1Q02641 598 aaPredicted RBP9.6□□□□□ -0.87
MSI2-213ENST00000581523 IFNLR1Q8IU57 520 aaPredicted RBP9.6□□□□□ -0.87
MSI2-213ENST00000581523 ABCC9O60706 1549 aa9.6□□□□□ -0.87
MSI2-213ENST00000581523 CCDC180Q9P1Z9 1646 aa9.58□□□□□ -0.88
MSI2-213ENST00000581523 DSG3P32926 999 aa9.52□□□□□ -0.89
MSI2-213ENST00000581523 ZNF692Q9BU19 519 aaPredicted RBP9.48□□□□□ -0.89
MSI2-213ENST00000581523 SPDYE2BA6NHP3 402 aa9.47□□□□□ -0.89
MSI2-213ENST00000581523 SPDYE6P0CI01 402 aa9.47□□□□□ -0.89
MSI2-213ENST00000581523 SPDYE2Q495Y8 402 aa9.47□□□□□ -0.89
MSI2-213ENST00000581523 PKD2Q13563 968 aa9.46□□□□□ -0.9
MSI2-213ENST00000581523 STAG3Q9UJ98 1225 aa9.45□□□□□ -0.9
MSI2-213ENST00000581523 SSUH2Q9Y2M2 353 aa9.45□□□□□ -0.9
MSI2-213ENST00000581523 PLCB2Q00722 1185 aa9.44□□□□□ -0.9
MSI2-213ENST00000581523 OSCARQ8IYS5 282 aa9.42□□□□□ -0.9
MSI2-213ENST00000581523 SPOCK2Q92563 424 aa9.4□□□□□ -0.9
MSI2-213ENST00000581523 KLHL34Q8N239 644 aa9.38□□□□□ -0.91
MSI2-213ENST00000581523 PABPN1Q86U42 306 aaKnown RBP eCLIP9.37□□□□□ -0.91
MSI2-213ENST00000581523 DCAF8L2P0C7V8 631 aa9.36□□□□□ -0.91
MSI2-213ENST00000581523 PLCD3Q8N3E9 789 aa9.33□□□□□ -0.92
MSI2-213ENST00000581523 MIER1Q8N108 512 aa9.31□□□□□ -0.92
MSI2-213ENST00000581523 ECM2O94769 699 aaPredicted RBP9.29□□□□□ -0.92
MSI2-213ENST00000581523 HAP1P54257 671 aaPredicted RBP9.26□□□□□ -0.93
MSI2-213ENST00000581523 BBXQ8WY36 941 aaPredicted RBP9.24□□□□□ -0.93
MSI2-213ENST00000581523 ZBTB47Q9UFB7 747 aaPredicted RBP9.23□□□□□ -0.93
MSI2-213ENST00000581523 PLEKHG5O94827 1062 aa9.21□□□□□ -0.94
MSI2-213ENST00000581523 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.21□□□□□ -0.94
MSI2-213ENST00000581523 NPM1P06748 294 aaKnown RBP eCLIP9.2□□□□□ -0.94
MSI2-213ENST00000581523 VSIG10Q8N0Z9 540 aa9.2□□□□□ -0.94
MSI2-213ENST00000581523 RGL2O15211 777 aa9.19□□□□□ -0.94
MSI2-213ENST00000581523 CIZ1Q9ULV3 898 aaPredicted RBP9.14□□□□□ -0.95
MSI2-213ENST00000581523 TRIM41Q8WV44 630 aa9.13□□□□□ -0.95
MSI2-213ENST00000581523 PAXIP1Q6ZW49 1069 aaPredicted RBP9.12□□□□□ -0.95
MSI2-213ENST00000581523 BCANQ96GW7 911 aa9.1□□□□□ -0.95
MSI2-213ENST00000581523 RB1CC1Q8TDY2 1594 aa9.1□□□□□ -0.95
MSI2-213ENST00000581523 CFAP44Q96MT7 982 aa9.08□□□□□ -0.96
MSI2-213ENST00000581523 SPRYD3Q8NCJ5 442 aa9.07□□□□□ -0.96
MSI2-213ENST00000581523 KDM2AQ9Y2K7 1162 aa9.07□□□□□ -0.96
MSI2-213ENST00000581523 GSE1Q14687 1217 aa9.06□□□□□ -0.96
MSI2-213ENST00000581523 SPDYE1Q8NFV5 336 aaPredicted RBP9.06□□□□□ -0.96
MSI2-213ENST00000581523 AKT1S1Q96B36 256 aa9.06□□□□□ -0.96
MSI2-213ENST00000581523 RBM42Q9BTD8 480 aaKnown RBP9.06□□□□□ -0.96
MSI2-213ENST00000581523 CHGAP10645 457 aaKnown RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms