Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLCN4P51793 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CLCN4P51793 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLCN4P51793 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLCN4P51793 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CLCN4P51793 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLCN4P51793 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLCN4P51793 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.04■□□□□ 0.8
CLCN4P51793 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.04■□□□□ 0.8
CLCN4P51793 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLCN4P51793 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLCN4P51793 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLCN4P51793 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLCN4P51793 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLCN4P51793 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.04■□□□□ 0.8
CLCN4P51793 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
CLCN4P51793 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLCN4P51793 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC20.04■□□□□ 0.8
CLCN4P51793 AL645929.1-201ENST00000420084 975 ntBASIC20.04■□□□□ 0.8
CLCN4P51793 TSPY21P-201ENST00000433481 731 ntBASIC20.04■□□□□ 0.8
CLCN4P51793 AC092597.1-201ENST00000487352 616 ntBASIC20.04■□□□□ 0.8
CLCN4P51793 AC034232.1-201ENST00000506026 1064 ntBASIC20.04■□□□□ 0.8
CLCN4P51793 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.04■□□□□ 0.8
CLCN4P51793 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.04■□□□□ 0.8
CLCN4P51793 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CLCN4P51793 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.04■□□□□ 0.8
CLCN4P51793 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.04■□□□□ 0.8
CLCN4P51793 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CLCN4P51793 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
CLCN4P51793 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLCN4P51793 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLCN4P51793 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLCN4P51793 GPAT2P1-201ENST00000444924 1672 ntBASIC20.03■□□□□ 0.8
CLCN4P51793 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLCN4P51793 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
CLCN4P51793 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLCN4P51793 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLCN4P51793 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLCN4P51793 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLCN4P51793 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLCN4P51793 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLCN4P51793 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLCN4P51793 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLCN4P51793 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLCN4P51793 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLCN4P51793 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLCN4P51793 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLCN4P51793 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLCN4P51793 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.03■□□□□ 0.8
CLCN4P51793 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.03■□□□□ 0.8
CLCN4P51793 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
CLCN4P51793 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLCN4P51793 AC099778.1-201ENST00000568593 1911 ntBASIC20.03■□□□□ 0.8
CLCN4P51793 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.03■□□□□ 0.8
CLCN4P51793 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.03■□□□□ 0.8
CLCN4P51793 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLCN4P51793 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.03■□□□□ 0.8
CLCN4P51793 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLCN4P51793 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLCN4P51793 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLCN4P51793 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.02■□□□□ 0.8
CLCN4P51793 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLCN4P51793 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CLCN4P51793 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLCN4P51793 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLCN4P51793 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.02■□□□□ 0.8
CLCN4P51793 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLCN4P51793 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.02■□□□□ 0.8
CLCN4P51793 AL691432.3-201ENST00000621860 400 ntBASIC20.02■□□□□ 0.8
CLCN4P51793 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLCN4P51793 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLCN4P51793 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLCN4P51793 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLCN4P51793 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLCN4P51793 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLCN4P51793 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLCN4P51793 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLCN4P51793 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.02■□□□□ 0.79
CLCN4P51793 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CLCN4P51793 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CLCN4P51793 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
CLCN4P51793 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CLCN4P51793 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.02■□□□□ 0.79
CLCN4P51793 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.79
CLCN4P51793 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CLCN4P51793 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLCN4P51793 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CLCN4P51793 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CLCN4P51793 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLCN4P51793 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLCN4P51793 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLCN4P51793 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.01■□□□□ 0.79
CLCN4P51793 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CLCN4P51793 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLCN4P51793 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.01■□□□□ 0.79
CLCN4P51793 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC20.01■□□□□ 0.79
CLCN4P51793 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC20.01■□□□□ 0.79
CLCN4P51793 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CLCN4P51793 AC092119.3-201ENST00000612618 583 ntBASIC20.01■□□□□ 0.79
CLCN4P51793 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms