Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
UBE2AP49459 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
UBE2AP49459 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC12.07□□□□□ -0.48
UBE2AP49459 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
UBE2AP49459 AL355802.2-201ENST00000402069 882 ntBASIC12.07□□□□□ -0.48
UBE2AP49459 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC12.07□□□□□ -0.48
UBE2AP49459 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
UBE2AP49459 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC12.07□□□□□ -0.48
UBE2AP49459 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC12.07□□□□□ -0.48
UBE2AP49459 MAP2K4P1-201ENST00000438453 1195 ntBASIC12.07□□□□□ -0.48
UBE2AP49459 GUSBP6-202ENST00000438529 1198 ntBASIC12.07□□□□□ -0.48
UBE2AP49459 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
UBE2AP49459 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
UBE2AP49459 AC090192.1-201ENST00000517740 490 ntBASIC12.07□□□□□ -0.48
UBE2AP49459 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
UBE2AP49459 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
UBE2AP49459 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC12.07□□□□□ -0.48
UBE2AP49459 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC12.07□□□□□ -0.48
UBE2AP49459 SOX15-203ENST00000570788 1093 ntBASIC12.07□□□□□ -0.48
UBE2AP49459 AC005332.7-201ENST00000614046 2005 ntBASIC12.07□□□□□ -0.48
UBE2AP49459 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
UBE2AP49459 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
UBE2AP49459 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
UBE2AP49459 AP000974.1-201ENST00000623909 2387 ntBASIC12.07□□□□□ -0.48
UBE2AP49459 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC12.07□□□□□ -0.48
UBE2AP49459 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
UBE2AP49459 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
UBE2AP49459 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC12.07□□□□□ -0.48
UBE2AP49459 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
UBE2AP49459 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
UBE2AP49459 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC12.07□□□□□ -0.48
UBE2AP49459 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
UBE2AP49459 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
UBE2AP49459 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
UBE2AP49459 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC12.07□□□□□ -0.48
UBE2AP49459 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
UBE2AP49459 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
UBE2AP49459 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
UBE2AP49459 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
UBE2AP49459 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
UBE2AP49459 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
UBE2AP49459 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
UBE2AP49459 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
UBE2AP49459 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
UBE2AP49459 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
UBE2AP49459 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
UBE2AP49459 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
UBE2AP49459 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
UBE2AP49459 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
UBE2AP49459 TFP1-202ENST00000475455 1573 ntBASIC12.06□□□□□ -0.48
UBE2AP49459 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC12.06□□□□□ -0.48
UBE2AP49459 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC12.06□□□□□ -0.48
UBE2AP49459 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
UBE2AP49459 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
UBE2AP49459 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC12.06□□□□□ -0.48
UBE2AP49459 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
UBE2AP49459 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
UBE2AP49459 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
UBE2AP49459 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
UBE2AP49459 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
UBE2AP49459 AC069152.1-201ENST00000438030 544 ntBASIC12.06□□□□□ -0.48
UBE2AP49459 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC12.06□□□□□ -0.48
UBE2AP49459 PRKY-204ENST00000533551 1019 ntBASIC12.06□□□□□ -0.48
UBE2AP49459 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC12.06□□□□□ -0.48
UBE2AP49459 PNN-205ENST00000556530 601 ntTSL 2 BASIC12.06□□□□□ -0.48
UBE2AP49459 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
UBE2AP49459 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
UBE2AP49459 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
UBE2AP49459 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
UBE2AP49459 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC12.06□□□□□ -0.48
UBE2AP49459 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
UBE2AP49459 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
UBE2AP49459 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
UBE2AP49459 AC098818.2-201ENST00000564925 2320 ntBASIC12.06□□□□□ -0.48
UBE2AP49459 AC124283.5-201ENST00000624661 1809 ntBASIC12.06□□□□□ -0.48
UBE2AP49459 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
UBE2AP49459 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
UBE2AP49459 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
UBE2AP49459 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
UBE2AP49459 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
UBE2AP49459 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
UBE2AP49459 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
UBE2AP49459 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
UBE2AP49459 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
UBE2AP49459 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
UBE2AP49459 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
UBE2AP49459 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
UBE2AP49459 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
UBE2AP49459 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC12.05□□□□□ -0.48
UBE2AP49459 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
UBE2AP49459 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
UBE2AP49459 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
UBE2AP49459 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC12.05□□□□□ -0.48
UBE2AP49459 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
UBE2AP49459 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
UBE2AP49459 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
UBE2AP49459 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
UBE2AP49459 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
UBE2AP49459 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC12.05□□□□□ -0.48
UBE2AP49459 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms