Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CX3CR1P49238 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CX3CR1P49238 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CX3CR1P49238 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.74■□□□□ 0.27
CX3CR1P49238 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.74■□□□□ 0.27
CX3CR1P49238 KRT18P6-201ENST00000555540 1265 ntBASIC16.74■□□□□ 0.27
CX3CR1P49238 C1QL1P1-201ENST00000568105 661 ntBASIC16.74■□□□□ 0.27
CX3CR1P49238 AC233263.1-201ENST00000578059 224 ntBASIC16.74■□□□□ 0.27
CX3CR1P49238 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.74■□□□□ 0.27
CX3CR1P49238 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CX3CR1P49238 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CX3CR1P49238 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CX3CR1P49238 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.73■□□□□ 0.27
CX3CR1P49238 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CX3CR1P49238 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CX3CR1P49238 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.73■□□□□ 0.27
CX3CR1P49238 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CX3CR1P49238 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CX3CR1P49238 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CX3CR1P49238 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CX3CR1P49238 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CX3CR1P49238 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CX3CR1P49238 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
CX3CR1P49238 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CX3CR1P49238 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CX3CR1P49238 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC16.73■□□□□ 0.27
CX3CR1P49238 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.73■□□□□ 0.27
CX3CR1P49238 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CX3CR1P49238 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.73■□□□□ 0.27
CX3CR1P49238 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CX3CR1P49238 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.73■□□□□ 0.27
CX3CR1P49238 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CX3CR1P49238 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.73■□□□□ 0.27
CX3CR1P49238 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.73■□□□□ 0.27
CX3CR1P49238 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
CX3CR1P49238 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CX3CR1P49238 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CX3CR1P49238 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CX3CR1P49238 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CX3CR1P49238 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.73■□□□□ 0.27
CX3CR1P49238 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CX3CR1P49238 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CX3CR1P49238 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CX3CR1P49238 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CX3CR1P49238 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.73■□□□□ 0.27
CX3CR1P49238 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
CX3CR1P49238 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CX3CR1P49238 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.73■□□□□ 0.27
CX3CR1P49238 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CX3CR1P49238 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CX3CR1P49238 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CX3CR1P49238 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CX3CR1P49238 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CX3CR1P49238 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CX3CR1P49238 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CX3CR1P49238 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.72■□□□□ 0.27
CX3CR1P49238 CROCCP3-202ENST00000420820 1947 ntBASIC16.72■□□□□ 0.27
CX3CR1P49238 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CX3CR1P49238 NEFHP1-201ENST00000412845 2629 ntBASIC16.72■□□□□ 0.27
CX3CR1P49238 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.72■□□□□ 0.27
CX3CR1P49238 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CX3CR1P49238 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CX3CR1P49238 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CX3CR1P49238 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CX3CR1P49238 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CX3CR1P49238 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CX3CR1P49238 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CX3CR1P49238 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CX3CR1P49238 AC239809.2-201ENST00000415381 517 ntBASIC16.72■□□□□ 0.27
CX3CR1P49238 MMAB-206ENST00000540016 945 ntTSL 3 BASIC16.72■□□□□ 0.27
CX3CR1P49238 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CX3CR1P49238 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.72■□□□□ 0.27
CX3CR1P49238 TBCB-214ENST00000629269 413 ntTSL 5 BASIC16.72■□□□□ 0.27
CX3CR1P49238 HLA-A-209ENST00000638375 975 ntBASIC16.72■□□□□ 0.27
CX3CR1P49238 AL023875.1-201ENST00000640777 796 ntBASIC16.72■□□□□ 0.27
CX3CR1P49238 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
CX3CR1P49238 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.72■□□□□ 0.27
CX3CR1P49238 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CX3CR1P49238 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CX3CR1P49238 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CX3CR1P49238 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CX3CR1P49238 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CX3CR1P49238 BCL2-203ENST00000589955 5011 ntBASIC16.72■□□□□ 0.27
CX3CR1P49238 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.72■□□□□ 0.27
CX3CR1P49238 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CX3CR1P49238 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CX3CR1P49238 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CX3CR1P49238 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.72■□□□□ 0.27
CX3CR1P49238 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.71■□□□□ 0.27
CX3CR1P49238 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CX3CR1P49238 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.71■□□□□ 0.27
CX3CR1P49238 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CX3CR1P49238 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CX3CR1P49238 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CX3CR1P49238 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CX3CR1P49238 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.71■□□□□ 0.27
CX3CR1P49238 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CX3CR1P49238 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CX3CR1P49238 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.71■□□□□ 0.27
CX3CR1P49238 KRASP1-201ENST00000407852 552 ntBASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms