Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
FDFT1P37268 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.42■□□□□ 0.7
FDFT1P37268 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.42■□□□□ 0.7
FDFT1P37268 AC124016.1-201ENST00000609552 612 ntBASIC19.42■□□□□ 0.7
FDFT1P37268 AC110285.5-201ENST00000611501 352 ntBASIC19.42■□□□□ 0.7
FDFT1P37268 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FDFT1P37268 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.42■□□□□ 0.7
FDFT1P37268 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FDFT1P37268 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FDFT1P37268 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FDFT1P37268 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
FDFT1P37268 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FDFT1P37268 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
FDFT1P37268 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FDFT1P37268 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
FDFT1P37268 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.42■□□□□ 0.7
FDFT1P37268 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
FDFT1P37268 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.42■□□□□ 0.7
FDFT1P37268 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FDFT1P37268 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
FDFT1P37268 KRT8P41-201ENST00000533985 1514 ntBASIC19.41■□□□□ 0.7
FDFT1P37268 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
FDFT1P37268 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FDFT1P37268 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
FDFT1P37268 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FDFT1P37268 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FDFT1P37268 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.41■□□□□ 0.7
FDFT1P37268 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FDFT1P37268 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FDFT1P37268 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.41■□□□□ 0.7
FDFT1P37268 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
FDFT1P37268 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
FDFT1P37268 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.41■□□□□ 0.7
FDFT1P37268 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.41■□□□□ 0.7
FDFT1P37268 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.41■□□□□ 0.7
FDFT1P37268 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.41■□□□□ 0.7
FDFT1P37268 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
FDFT1P37268 RN7SL471P-201ENST00000580476 299 ntBASIC19.41■□□□□ 0.7
FDFT1P37268 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FDFT1P37268 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FDFT1P37268 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.41■□□□□ 0.7
FDFT1P37268 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.41■□□□□ 0.7
FDFT1P37268 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FDFT1P37268 AC083906.6-201ENST00000641366 219 ntBASIC19.41■□□□□ 0.7
FDFT1P37268 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.41■□□□□ 0.7
FDFT1P37268 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
FDFT1P37268 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.41■□□□□ 0.7
FDFT1P37268 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FDFT1P37268 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FDFT1P37268 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
FDFT1P37268 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.4■□□□□ 0.7
FDFT1P37268 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FDFT1P37268 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
FDFT1P37268 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FDFT1P37268 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
FDFT1P37268 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.4■□□□□ 0.7
FDFT1P37268 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FDFT1P37268 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
FDFT1P37268 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.4■□□□□ 0.7
FDFT1P37268 AL512353.2-201ENST00000448759 1962 ntBASIC19.4■□□□□ 0.7
FDFT1P37268 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.4■□□□□ 0.7
FDFT1P37268 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FDFT1P37268 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FDFT1P37268 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
FDFT1P37268 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
FDFT1P37268 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FDFT1P37268 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.4■□□□□ 0.7
FDFT1P37268 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.4■□□□□ 0.7
FDFT1P37268 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
FDFT1P37268 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
FDFT1P37268 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
FDFT1P37268 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
FDFT1P37268 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
FDFT1P37268 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
FDFT1P37268 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FDFT1P37268 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FDFT1P37268 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
FDFT1P37268 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.39■□□□□ 0.69
FDFT1P37268 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
FDFT1P37268 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
FDFT1P37268 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.39■□□□□ 0.69
FDFT1P37268 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.39■□□□□ 0.69
FDFT1P37268 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.39■□□□□ 0.69
FDFT1P37268 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.39■□□□□ 0.69
FDFT1P37268 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.39■□□□□ 0.69
FDFT1P37268 AL445675.2-201ENST00000620291 557 ntBASIC19.39■□□□□ 0.69
FDFT1P37268 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
FDFT1P37268 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FDFT1P37268 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FDFT1P37268 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
FDFT1P37268 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.39■□□□□ 0.69
FDFT1P37268 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
FDFT1P37268 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
FDFT1P37268 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
FDFT1P37268 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FDFT1P37268 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FDFT1P37268 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
FDFT1P37268 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
FDFT1P37268 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.39■□□□□ 0.69
FDFT1P37268 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms