Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.97■□□□□ 0.63
HMGCLP35914 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMGCLP35914 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.97■□□□□ 0.63
HMGCLP35914 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.97■□□□□ 0.63
HMGCLP35914 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMGCLP35914 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMGCLP35914 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.97■□□□□ 0.63
HMGCLP35914 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.97■□□□□ 0.63
HMGCLP35914 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMGCLP35914 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.97■□□□□ 0.63
HMGCLP35914 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.97■□□□□ 0.63
HMGCLP35914 TSPY15P-201ENST00000457163 923 ntBASIC18.97■□□□□ 0.63
HMGCLP35914 CA15P1-201ENST00000481698 905 ntBASIC18.97■□□□□ 0.63
HMGCLP35914 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMGCLP35914 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.97■□□□□ 0.63
HMGCLP35914 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMGCLP35914 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMGCLP35914 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
HMGCLP35914 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.97■□□□□ 0.63
HMGCLP35914 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.97■□□□□ 0.63
HMGCLP35914 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMGCLP35914 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.97■□□□□ 0.63
HMGCLP35914 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HMGCLP35914 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMGCLP35914 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMGCLP35914 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HMGCLP35914 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMGCLP35914 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGCLP35914 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.96■□□□□ 0.63
HMGCLP35914 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGCLP35914 BX323043.1-201ENST00000641006 1765 ntBASIC18.96■□□□□ 0.63
HMGCLP35914 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.96■□□□□ 0.63
HMGCLP35914 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.96■□□□□ 0.63
HMGCLP35914 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HMGCLP35914 AC018445.3-201ENST00000624177 1945 ntBASIC18.96■□□□□ 0.63
HMGCLP35914 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.96■□□□□ 0.63
HMGCLP35914 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
HMGCLP35914 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGCLP35914 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGCLP35914 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
HMGCLP35914 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
HMGCLP35914 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGCLP35914 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.96■□□□□ 0.63
HMGCLP35914 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGCLP35914 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.96■□□□□ 0.63
HMGCLP35914 KRT8P3-201ENST00000519669 1449 ntBASIC18.96■□□□□ 0.63
HMGCLP35914 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGCLP35914 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGCLP35914 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGCLP35914 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.96■□□□□ 0.63
HMGCLP35914 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HMGCLP35914 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.96■□□□□ 0.63
HMGCLP35914 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.96■□□□□ 0.63
HMGCLP35914 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGCLP35914 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
HMGCLP35914 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
HMGCLP35914 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HMGCLP35914 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGCLP35914 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGCLP35914 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.95■□□□□ 0.62
HMGCLP35914 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGCLP35914 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGCLP35914 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGCLP35914 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.95■□□□□ 0.62
HMGCLP35914 MIR1238-201ENST00000408483 83 ntBASIC18.95■□□□□ 0.62
HMGCLP35914 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HMGCLP35914 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.95■□□□□ 0.62
HMGCLP35914 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.95■□□□□ 0.62
HMGCLP35914 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
HMGCLP35914 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGCLP35914 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.95■□□□□ 0.62
HMGCLP35914 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGCLP35914 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.95■□□□□ 0.62
HMGCLP35914 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.94■□□□□ 0.62
HMGCLP35914 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGCLP35914 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
HMGCLP35914 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGCLP35914 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HMGCLP35914 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.94■□□□□ 0.62
HMGCLP35914 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
HMGCLP35914 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGCLP35914 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGCLP35914 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGCLP35914 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HMGCLP35914 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGCLP35914 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGCLP35914 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
HMGCLP35914 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.94■□□□□ 0.62
HMGCLP35914 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGCLP35914 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.94■□□□□ 0.62
HMGCLP35914 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HMGCLP35914 AL390955.1-201ENST00000428694 934 ntBASIC18.94■□□□□ 0.62
HMGCLP35914 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGCLP35914 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.94■□□□□ 0.62
HMGCLP35914 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGCLP35914 AP000974.1-201ENST00000623909 2387 ntBASIC18.94■□□□□ 0.62
HMGCLP35914 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGCLP35914 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.94■□□□□ 0.62
HMGCLP35914 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGCLP35914 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms