Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RORAP35398 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.09■□□□□ 0.49
RORAP35398 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
RORAP35398 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RORAP35398 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
RORAP35398 AK4P3-201ENST00000418260 669 ntBASIC18.09■□□□□ 0.49
RORAP35398 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.09■□□□□ 0.49
RORAP35398 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.09■□□□□ 0.49
RORAP35398 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RORAP35398 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.09■□□□□ 0.49
RORAP35398 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
RORAP35398 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RORAP35398 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RORAP35398 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RORAP35398 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RORAP35398 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
RORAP35398 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
RORAP35398 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RORAP35398 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.09■□□□□ 0.49
RORAP35398 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RORAP35398 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.08■□□□□ 0.49
RORAP35398 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.08■□□□□ 0.49
RORAP35398 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RORAP35398 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.08■□□□□ 0.49
RORAP35398 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RORAP35398 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.08■□□□□ 0.49
RORAP35398 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RORAP35398 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RORAP35398 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
RORAP35398 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RORAP35398 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.08■□□□□ 0.48
RORAP35398 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.08■□□□□ 0.48
RORAP35398 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
RORAP35398 AC063952.2-201ENST00000498792 1227 ntBASIC18.08■□□□□ 0.48
RORAP35398 AP003041.3-201ENST00000527151 707 ntBASIC18.08■□□□□ 0.48
RORAP35398 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.08■□□□□ 0.48
RORAP35398 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.08■□□□□ 0.48
RORAP35398 TREX1-205ENST00000625293 1783 ntBASIC18.08■□□□□ 0.48
RORAP35398 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
RORAP35398 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
RORAP35398 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.08■□□□□ 0.48
RORAP35398 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
RORAP35398 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RORAP35398 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RORAP35398 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
RORAP35398 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RORAP35398 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RORAP35398 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RORAP35398 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
RORAP35398 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RORAP35398 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.07■□□□□ 0.48
RORAP35398 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RORAP35398 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RORAP35398 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RORAP35398 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RORAP35398 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RORAP35398 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
RORAP35398 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RORAP35398 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RORAP35398 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
RORAP35398 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.07■□□□□ 0.48
RORAP35398 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RORAP35398 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RORAP35398 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.07■□□□□ 0.48
RORAP35398 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.07■□□□□ 0.48
RORAP35398 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.07■□□□□ 0.48
RORAP35398 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
RORAP35398 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.07■□□□□ 0.48
RORAP35398 AL512604.3-201ENST00000569583 964 ntBASIC18.07■□□□□ 0.48
RORAP35398 AC139887.4-201ENST00000607877 719 ntBASIC18.07■□□□□ 0.48
RORAP35398 AC141257.4-201ENST00000634557 245 ntBASIC18.07■□□□□ 0.48
RORAP35398 AC136944.6-201ENST00000634818 245 ntBASIC18.07■□□□□ 0.48
RORAP35398 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RORAP35398 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
RORAP35398 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RORAP35398 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.07■□□□□ 0.48
RORAP35398 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.07■□□□□ 0.48
RORAP35398 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
RORAP35398 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RORAP35398 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RORAP35398 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.06■□□□□ 0.48
RORAP35398 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
RORAP35398 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RORAP35398 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RORAP35398 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.06■□□□□ 0.48
RORAP35398 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RORAP35398 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RORAP35398 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RORAP35398 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RORAP35398 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.06■□□□□ 0.48
RORAP35398 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
RORAP35398 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.06■□□□□ 0.48
RORAP35398 AC022616.7-201ENST00000525383 220 ntBASIC18.06■□□□□ 0.48
RORAP35398 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
RORAP35398 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.06■□□□□ 0.48
RORAP35398 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
RORAP35398 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RORAP35398 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.06■□□□□ 0.48
RORAP35398 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.06■□□□□ 0.48
RORAP35398 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms