Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 AC024243.1-201ENST00000609234 778 ntBASIC18.64■□□□□ 0.57
LAMA1P25391 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LAMA1P25391 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.64■□□□□ 0.57
LAMA1P25391 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.64■□□□□ 0.57
LAMA1P25391 AC093525.10-201ENST00000625130 1569 ntBASIC18.64■□□□□ 0.57
LAMA1P25391 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
LAMA1P25391 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
LAMA1P25391 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.64■□□□□ 0.57
LAMA1P25391 CHCHD2P8-201ENST00000429873 447 ntBASIC18.64■□□□□ 0.57
LAMA1P25391 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.64■□□□□ 0.57
LAMA1P25391 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.64■□□□□ 0.57
LAMA1P25391 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.64■□□□□ 0.57
LAMA1P25391 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LAMA1P25391 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LAMA1P25391 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LAMA1P25391 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.64■□□□□ 0.57
LAMA1P25391 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LAMA1P25391 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LAMA1P25391 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LAMA1P25391 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LAMA1P25391 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LAMA1P25391 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LAMA1P25391 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LAMA1P25391 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.63■□□□□ 0.57
LAMA1P25391 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LAMA1P25391 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.63■□□□□ 0.57
LAMA1P25391 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
LAMA1P25391 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LAMA1P25391 TPSP2-201ENST00000561760 610 ntBASIC18.63■□□□□ 0.57
LAMA1P25391 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
LAMA1P25391 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LAMA1P25391 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.63■□□□□ 0.57
LAMA1P25391 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.63■□□□□ 0.57
LAMA1P25391 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.63■□□□□ 0.57
LAMA1P25391 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LAMA1P25391 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LAMA1P25391 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LAMA1P25391 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
LAMA1P25391 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.63■□□□□ 0.57
LAMA1P25391 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.63■□□□□ 0.57
LAMA1P25391 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.63■□□□□ 0.57
LAMA1P25391 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LAMA1P25391 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LAMA1P25391 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LAMA1P25391 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.62■□□□□ 0.57
LAMA1P25391 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LAMA1P25391 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
LAMA1P25391 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LAMA1P25391 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LAMA1P25391 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.62■□□□□ 0.57
LAMA1P25391 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
LAMA1P25391 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LAMA1P25391 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LAMA1P25391 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.62■□□□□ 0.57
LAMA1P25391 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LAMA1P25391 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LAMA1P25391 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.62■□□□□ 0.57
LAMA1P25391 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.62■□□□□ 0.57
LAMA1P25391 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.62■□□□□ 0.57
LAMA1P25391 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LAMA1P25391 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.62■□□□□ 0.57
LAMA1P25391 AP005901.3-202ENST00000581653 237 ntBASIC18.62■□□□□ 0.57
LAMA1P25391 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LAMA1P25391 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LAMA1P25391 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.62■□□□□ 0.57
LAMA1P25391 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LAMA1P25391 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LAMA1P25391 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LAMA1P25391 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LAMA1P25391 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
LAMA1P25391 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LAMA1P25391 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LAMA1P25391 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.61■□□□□ 0.57
LAMA1P25391 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.61■□□□□ 0.57
LAMA1P25391 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
LAMA1P25391 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LAMA1P25391 AC099778.1-201ENST00000568593 1911 ntBASIC18.61■□□□□ 0.57
LAMA1P25391 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LAMA1P25391 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LAMA1P25391 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LAMA1P25391 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LAMA1P25391 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
LAMA1P25391 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LAMA1P25391 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LAMA1P25391 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.61■□□□□ 0.57
LAMA1P25391 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LAMA1P25391 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LAMA1P25391 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
LAMA1P25391 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LAMA1P25391 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
LAMA1P25391 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.61■□□□□ 0.57
LAMA1P25391 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LAMA1P25391 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LAMA1P25391 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
LAMA1P25391 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.6■□□□□ 0.57
LAMA1P25391 SDHAP1-207ENST00000440850 2000 ntBASIC18.6■□□□□ 0.57
LAMA1P25391 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.6■□□□□ 0.57
LAMA1P25391 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LAMA1P25391 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
LAMA1P25391 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms