Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TNFRSF1BP20333 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TNFRSF1BP20333 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TNFRSF1BP20333 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.7■□□□□ 0.42
TNFRSF1BP20333 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.7■□□□□ 0.42
TNFRSF1BP20333 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TNFRSF1BP20333 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.7■□□□□ 0.42
TNFRSF1BP20333 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TNFRSF1BP20333 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TNFRSF1BP20333 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
TNFRSF1BP20333 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.7■□□□□ 0.42
TNFRSF1BP20333 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TNFRSF1BP20333 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
TNFRSF1BP20333 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TNFRSF1BP20333 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TNFRSF1BP20333 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNFRSF1BP20333 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
TNFRSF1BP20333 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNFRSF1BP20333 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNFRSF1BP20333 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TNFRSF1BP20333 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNFRSF1BP20333 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNFRSF1BP20333 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNFRSF1BP20333 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNFRSF1BP20333 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.69■□□□□ 0.42
TNFRSF1BP20333 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.69■□□□□ 0.42
TNFRSF1BP20333 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.69■□□□□ 0.42
TNFRSF1BP20333 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.69■□□□□ 0.42
TNFRSF1BP20333 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.69■□□□□ 0.42
TNFRSF1BP20333 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
TNFRSF1BP20333 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNFRSF1BP20333 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNFRSF1BP20333 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.69■□□□□ 0.42
TNFRSF1BP20333 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNFRSF1BP20333 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TNFRSF1BP20333 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TNFRSF1BP20333 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.68■□□□□ 0.42
TNFRSF1BP20333 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.68■□□□□ 0.42
TNFRSF1BP20333 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TNFRSF1BP20333 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TNFRSF1BP20333 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
TNFRSF1BP20333 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TNFRSF1BP20333 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TNFRSF1BP20333 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TNFRSF1BP20333 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TNFRSF1BP20333 MIR935-201ENST00000401179 91 ntBASIC17.68■□□□□ 0.42
TNFRSF1BP20333 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TNFRSF1BP20333 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.68■□□□□ 0.42
TNFRSF1BP20333 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
TNFRSF1BP20333 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.68■□□□□ 0.42
TNFRSF1BP20333 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.68■□□□□ 0.42
TNFRSF1BP20333 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.68■□□□□ 0.42
TNFRSF1BP20333 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.68■□□□□ 0.42
TNFRSF1BP20333 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.68■□□□□ 0.42
TNFRSF1BP20333 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
TNFRSF1BP20333 LETM1P2-201ENST00000597330 2178 ntBASIC17.68■□□□□ 0.42
TNFRSF1BP20333 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
TNFRSF1BP20333 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TNFRSF1BP20333 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.68■□□□□ 0.42
TNFRSF1BP20333 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.68■□□□□ 0.42
TNFRSF1BP20333 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
TNFRSF1BP20333 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.68■□□□□ 0.42
TNFRSF1BP20333 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TNFRSF1BP20333 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TNFRSF1BP20333 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TNFRSF1BP20333 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.68■□□□□ 0.42
TNFRSF1BP20333 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TNFRSF1BP20333 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.68■□□□□ 0.42
TNFRSF1BP20333 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TNFRSF1BP20333 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFRSF1BP20333 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
TNFRSF1BP20333 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFRSF1BP20333 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFRSF1BP20333 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
TNFRSF1BP20333 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
TNFRSF1BP20333 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TNFRSF1BP20333 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFRSF1BP20333 ANO7L1-203ENST00000602586 1720 ntBASIC17.67■□□□□ 0.42
TNFRSF1BP20333 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TNFRSF1BP20333 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
TNFRSF1BP20333 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TNFRSF1BP20333 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.67■□□□□ 0.42
TNFRSF1BP20333 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TNFRSF1BP20333 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFRSF1BP20333 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFRSF1BP20333 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFRSF1BP20333 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.67■□□□□ 0.42
TNFRSF1BP20333 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.67■□□□□ 0.42
TNFRSF1BP20333 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.67■□□□□ 0.42
TNFRSF1BP20333 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TNFRSF1BP20333 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.67■□□□□ 0.42
TNFRSF1BP20333 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.67■□□□□ 0.42
TNFRSF1BP20333 AC008687.6-201ENST00000596318 630 ntBASIC17.67■□□□□ 0.42
TNFRSF1BP20333 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.67■□□□□ 0.42
TNFRSF1BP20333 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.67■□□□□ 0.42
TNFRSF1BP20333 AL121829.2-201ENST00000620908 328 ntBASIC17.67■□□□□ 0.42
TNFRSF1BP20333 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TNFRSF1BP20333 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFRSF1BP20333 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.67■□□□□ 0.42
TNFRSF1BP20333 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms