Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
FREM3P0C091 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.29■□□□□ 0.36
FREM3P0C091 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.29■□□□□ 0.36
FREM3P0C091 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.29■□□□□ 0.36
FREM3P0C091 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.29■□□□□ 0.36
FREM3P0C091 PRSS44-201ENST00000515154 1146 ntBASIC17.29■□□□□ 0.36
FREM3P0C091 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
FREM3P0C091 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
FREM3P0C091 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.29■□□□□ 0.36
FREM3P0C091 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
FREM3P0C091 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FREM3P0C091 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.29■□□□□ 0.36
FREM3P0C091 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FREM3P0C091 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.29■□□□□ 0.36
FREM3P0C091 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
FREM3P0C091 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.29■□□□□ 0.36
FREM3P0C091 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FREM3P0C091 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
FREM3P0C091 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.28■□□□□ 0.36
FREM3P0C091 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
FREM3P0C091 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FREM3P0C091 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
FREM3P0C091 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FREM3P0C091 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
FREM3P0C091 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FREM3P0C091 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FREM3P0C091 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
FREM3P0C091 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.28■□□□□ 0.36
FREM3P0C091 LIN28AP1-201ENST00000429574 405 ntBASIC17.28■□□□□ 0.36
FREM3P0C091 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.28■□□□□ 0.36
FREM3P0C091 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.28■□□□□ 0.36
FREM3P0C091 AL359075.1-203ENST00000462729 1002 ntBASIC17.28■□□□□ 0.36
FREM3P0C091 AC130371.2-201ENST00000619443 611 ntBASIC17.28■□□□□ 0.36
FREM3P0C091 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
FREM3P0C091 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.28■□□□□ 0.36
FREM3P0C091 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.28■□□□□ 0.36
FREM3P0C091 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FREM3P0C091 TEX21P-204ENST00000641479 1693 ntBASIC17.28■□□□□ 0.36
FREM3P0C091 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.28■□□□□ 0.36
FREM3P0C091 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.28■□□□□ 0.36
FREM3P0C091 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
FREM3P0C091 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
FREM3P0C091 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FREM3P0C091 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.28■□□□□ 0.36
FREM3P0C091 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.28■□□□□ 0.36
FREM3P0C091 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
FREM3P0C091 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
FREM3P0C091 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
FREM3P0C091 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
FREM3P0C091 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.27■□□□□ 0.36
FREM3P0C091 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
FREM3P0C091 AP003041.3-201ENST00000527151 707 ntBASIC17.27■□□□□ 0.36
FREM3P0C091 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.27■□□□□ 0.36
FREM3P0C091 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.27■□□□□ 0.36
FREM3P0C091 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
FREM3P0C091 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
FREM3P0C091 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.27■□□□□ 0.36
FREM3P0C091 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
FREM3P0C091 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.27■□□□□ 0.36
FREM3P0C091 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.27■□□□□ 0.36
FREM3P0C091 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
FREM3P0C091 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
FREM3P0C091 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
FREM3P0C091 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
FREM3P0C091 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.27■□□□□ 0.35
FREM3P0C091 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
FREM3P0C091 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
FREM3P0C091 TSPY14P-201ENST00000303979 915 ntBASIC17.27■□□□□ 0.35
FREM3P0C091 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
FREM3P0C091 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.35
FREM3P0C091 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
FREM3P0C091 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
FREM3P0C091 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
FREM3P0C091 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
FREM3P0C091 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.27■□□□□ 0.35
FREM3P0C091 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.27■□□□□ 0.35
FREM3P0C091 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.27■□□□□ 0.35
FREM3P0C091 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.35
FREM3P0C091 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
FREM3P0C091 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.27■□□□□ 0.35
FREM3P0C091 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
FREM3P0C091 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
FREM3P0C091 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
FREM3P0C091 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
FREM3P0C091 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
FREM3P0C091 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FREM3P0C091 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
FREM3P0C091 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FREM3P0C091 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FREM3P0C091 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.26■□□□□ 0.35
FREM3P0C091 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.26■□□□□ 0.35
FREM3P0C091 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
FREM3P0C091 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
FREM3P0C091 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FREM3P0C091 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.26■□□□□ 0.35
FREM3P0C091 FAM210CP-201ENST00000445714 574 ntBASIC17.26■□□□□ 0.35
FREM3P0C091 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.26■□□□□ 0.35
FREM3P0C091 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
FREM3P0C091 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
FREM3P0C091 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms