Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC14.5□□□□□ -0.09
TCRAP04437 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC14.5□□□□□ -0.09
TCRAP04437 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TCRAP04437 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
TCRAP04437 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
TCRAP04437 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TCRAP04437 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TCRAP04437 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TCRAP04437 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TCRAP04437 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC14.5□□□□□ -0.09
TCRAP04437 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TCRAP04437 GOLGA6L3-201ENST00000507199 1679 ntBASIC14.5□□□□□ -0.09
TCRAP04437 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TCRAP04437 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TCRAP04437 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
TCRAP04437 APTR-203ENST00000430801 583 ntTSL 5 BASIC14.5□□□□□ -0.09
TCRAP04437 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TCRAP04437 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC14.5□□□□□ -0.09
TCRAP04437 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC14.5□□□□□ -0.09
TCRAP04437 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
TCRAP04437 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
TCRAP04437 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC14.5□□□□□ -0.09
TCRAP04437 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TCRAP04437 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC14.5□□□□□ -0.09
TCRAP04437 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TCRAP04437 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TCRAP04437 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TCRAP04437 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
TCRAP04437 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TCRAP04437 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
TCRAP04437 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
TCRAP04437 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC14.49□□□□□ -0.09
TCRAP04437 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TCRAP04437 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TCRAP04437 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
TCRAP04437 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TCRAP04437 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TCRAP04437 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TCRAP04437 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC14.49□□□□□ -0.09
TCRAP04437 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TCRAP04437 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TCRAP04437 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TCRAP04437 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC14.49□□□□□ -0.09
TCRAP04437 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC14.49□□□□□ -0.09
TCRAP04437 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TCRAP04437 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TCRAP04437 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TCRAP04437 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TCRAP04437 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TCRAP04437 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TCRAP04437 LSM12P1-201ENST00000411836 588 ntBASIC14.49□□□□□ -0.09
TCRAP04437 AL512625.2-201ENST00000417533 625 ntBASIC14.49□□□□□ -0.09
TCRAP04437 ZNRF2P3-201ENST00000424200 374 ntBASIC14.49□□□□□ -0.09
TCRAP04437 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TCRAP04437 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
TCRAP04437 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TCRAP04437 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TCRAP04437 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC14.49□□□□□ -0.09
TCRAP04437 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC14.49□□□□□ -0.09
TCRAP04437 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC14.49□□□□□ -0.09
TCRAP04437 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC14.49□□□□□ -0.09
TCRAP04437 AC011767.1-201ENST00000617410 1153 ntBASIC14.49□□□□□ -0.09
TCRAP04437 AC231657.2-201ENST00000624556 255 ntBASIC14.49□□□□□ -0.09
TCRAP04437 PARP1-210ENST00000629232 477 ntTSL 5 BASIC14.49□□□□□ -0.09
TCRAP04437 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TCRAP04437 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TCRAP04437 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TCRAP04437 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
TCRAP04437 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC14.49□□□□□ -0.09
TCRAP04437 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TCRAP04437 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TCRAP04437 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TCRAP04437 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
TCRAP04437 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TCRAP04437 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC14.49□□□□□ -0.09
TCRAP04437 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
TCRAP04437 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
TCRAP04437 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TCRAP04437 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
TCRAP04437 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TCRAP04437 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TCRAP04437 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC14.48□□□□□ -0.09
TCRAP04437 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC14.48□□□□□ -0.09
TCRAP04437 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
TCRAP04437 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TCRAP04437 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC14.48□□□□□ -0.09
TCRAP04437 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TCRAP04437 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC14.48□□□□□ -0.09
TCRAP04437 AP000997.3-201ENST00000623333 2250 ntBASIC14.48□□□□□ -0.09
TCRAP04437 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TCRAP04437 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC14.48□□□□□ -0.09
TCRAP04437 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TCRAP04437 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TCRAP04437 AC073210.2-201ENST00000430369 194 ntBASIC14.48□□□□□ -0.09
TCRAP04437 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC14.48□□□□□ -0.09
TCRAP04437 HES2-206ENST00000489730 730 ntTSL 2 BASIC14.48□□□□□ -0.09
TCRAP04437 ISCU-212ENST00000547005 795 ntTSL 3 BASIC14.48□□□□□ -0.09
TCRAP04437 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TCRAP04437 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TCRAP04437 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms