Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 LINC01465-201ENST00000408887 1940 ntBASIC17.78■□□□□ 0.44
PDGFAP04085 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
PDGFAP04085 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDGFAP04085 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.78■□□□□ 0.44
PDGFAP04085 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDGFAP04085 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDGFAP04085 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.78■□□□□ 0.44
PDGFAP04085 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.78■□□□□ 0.44
PDGFAP04085 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDGFAP04085 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDGFAP04085 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDGFAP04085 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.78■□□□□ 0.44
PDGFAP04085 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.78■□□□□ 0.44
PDGFAP04085 KRT18P38-201ENST00000449496 1282 ntBASIC17.78■□□□□ 0.44
PDGFAP04085 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.78■□□□□ 0.44
PDGFAP04085 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.78■□□□□ 0.44
PDGFAP04085 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDGFAP04085 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.78■□□□□ 0.44
PDGFAP04085 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDGFAP04085 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.78■□□□□ 0.44
PDGFAP04085 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.78■□□□□ 0.44
PDGFAP04085 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.78■□□□□ 0.44
PDGFAP04085 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.78■□□□□ 0.44
PDGFAP04085 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.78■□□□□ 0.44
PDGFAP04085 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.78■□□□□ 0.44
PDGFAP04085 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDGFAP04085 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
PDGFAP04085 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PDGFAP04085 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDGFAP04085 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PDGFAP04085 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDGFAP04085 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDGFAP04085 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PDGFAP04085 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PDGFAP04085 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDGFAP04085 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDGFAP04085 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDGFAP04085 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.77■□□□□ 0.44
PDGFAP04085 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDGFAP04085 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDGFAP04085 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
PDGFAP04085 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.77■□□□□ 0.44
PDGFAP04085 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
PDGFAP04085 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.77■□□□□ 0.44
PDGFAP04085 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.77■□□□□ 0.44
PDGFAP04085 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDGFAP04085 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PDGFAP04085 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDGFAP04085 AL671277.2-201ENST00000458060 996 ntBASIC17.77■□□□□ 0.44
PDGFAP04085 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.77■□□□□ 0.44
PDGFAP04085 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
PDGFAP04085 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.77■□□□□ 0.44
PDGFAP04085 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.77■□□□□ 0.44
PDGFAP04085 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.77■□□□□ 0.44
PDGFAP04085 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PDGFAP04085 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PDGFAP04085 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.77■□□□□ 0.43
PDGFAP04085 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.77■□□□□ 0.43
PDGFAP04085 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.77■□□□□ 0.43
PDGFAP04085 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.77■□□□□ 0.43
PDGFAP04085 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDGFAP04085 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDGFAP04085 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
PDGFAP04085 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PDGFAP04085 AC005332.1-201ENST00000577698 1310 ntBASIC17.76■□□□□ 0.43
PDGFAP04085 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDGFAP04085 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PDGFAP04085 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDGFAP04085 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.76■□□□□ 0.43
PDGFAP04085 KRT8P8-201ENST00000434750 1448 ntBASIC17.76■□□□□ 0.43
PDGFAP04085 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDGFAP04085 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDGFAP04085 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDGFAP04085 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.76■□□□□ 0.43
PDGFAP04085 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PDGFAP04085 HOMER2P1-201ENST00000455653 964 ntBASIC17.76■□□□□ 0.43
PDGFAP04085 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.76■□□□□ 0.43
PDGFAP04085 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.76■□□□□ 0.43
PDGFAP04085 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.76■□□□□ 0.43
PDGFAP04085 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDGFAP04085 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PDGFAP04085 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDGFAP04085 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PDGFAP04085 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDGFAP04085 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDGFAP04085 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDGFAP04085 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDGFAP04085 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDGFAP04085 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDGFAP04085 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDGFAP04085 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDGFAP04085 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDGFAP04085 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.75■□□□□ 0.43
PDGFAP04085 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDGFAP04085 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDGFAP04085 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
PDGFAP04085 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.75■□□□□ 0.43
PDGFAP04085 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDGFAP04085 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDGFAP04085 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms