Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
MT-ND3P03897 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
MT-ND3P03897 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MT-ND3P03897 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.39■□□□□ 0.69
MT-ND3P03897 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.39■□□□□ 0.69
MT-ND3P03897 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.39■□□□□ 0.69
MT-ND3P03897 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.39■□□□□ 0.69
MT-ND3P03897 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.39■□□□□ 0.69
MT-ND3P03897 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.39■□□□□ 0.69
MT-ND3P03897 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MT-ND3P03897 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
MT-ND3P03897 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MT-ND3P03897 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
MT-ND3P03897 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.39■□□□□ 0.69
MT-ND3P03897 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
MT-ND3P03897 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
MT-ND3P03897 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.39■□□□□ 0.69
MT-ND3P03897 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
MT-ND3P03897 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
MT-ND3P03897 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
MT-ND3P03897 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MT-ND3P03897 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MT-ND3P03897 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MT-ND3P03897 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
MT-ND3P03897 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
MT-ND3P03897 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MT-ND3P03897 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
MT-ND3P03897 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MT-ND3P03897 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MT-ND3P03897 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MT-ND3P03897 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.38■□□□□ 0.69
MT-ND3P03897 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.38■□□□□ 0.69
MT-ND3P03897 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MT-ND3P03897 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
MT-ND3P03897 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
MT-ND3P03897 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
MT-ND3P03897 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
MT-ND3P03897 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
MT-ND3P03897 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.38■□□□□ 0.69
MT-ND3P03897 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.38■□□□□ 0.69
MT-ND3P03897 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.38■□□□□ 0.69
MT-ND3P03897 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.38■□□□□ 0.69
MT-ND3P03897 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
MT-ND3P03897 AC079598.2-202ENST00000546624 1451 ntBASIC19.38■□□□□ 0.69
MT-ND3P03897 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.38■□□□□ 0.69
MT-ND3P03897 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
MT-ND3P03897 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MT-ND3P03897 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MT-ND3P03897 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MT-ND3P03897 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.37■□□□□ 0.69
MT-ND3P03897 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MT-ND3P03897 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
MT-ND3P03897 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
MT-ND3P03897 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MT-ND3P03897 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
MT-ND3P03897 AL031598.1-201ENST00000561511 1773 ntBASIC19.37■□□□□ 0.69
MT-ND3P03897 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MT-ND3P03897 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MT-ND3P03897 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
MT-ND3P03897 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MT-ND3P03897 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.37■□□□□ 0.69
MT-ND3P03897 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
MT-ND3P03897 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.37■□□□□ 0.69
MT-ND3P03897 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
MT-ND3P03897 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
MT-ND3P03897 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
MT-ND3P03897 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
MT-ND3P03897 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.37■□□□□ 0.69
MT-ND3P03897 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.37■□□□□ 0.69
MT-ND3P03897 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.37■□□□□ 0.69
MT-ND3P03897 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.37■□□□□ 0.69
MT-ND3P03897 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
MT-ND3P03897 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
MT-ND3P03897 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.37■□□□□ 0.69
MT-ND3P03897 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.37■□□□□ 0.69
MT-ND3P03897 WIZP1-201ENST00000531444 2299 ntBASIC19.37■□□□□ 0.69
MT-ND3P03897 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
MT-ND3P03897 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MT-ND3P03897 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MT-ND3P03897 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.37■□□□□ 0.69
MT-ND3P03897 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MT-ND3P03897 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MT-ND3P03897 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MT-ND3P03897 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
MT-ND3P03897 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MT-ND3P03897 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MT-ND3P03897 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MT-ND3P03897 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
MT-ND3P03897 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
MT-ND3P03897 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.36■□□□□ 0.69
MT-ND3P03897 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
MT-ND3P03897 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MT-ND3P03897 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MT-ND3P03897 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.36■□□□□ 0.69
MT-ND3P03897 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
MT-ND3P03897 AC090164.3-201ENST00000610780 2143 ntBASIC19.36■□□□□ 0.69
MT-ND3P03897 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
MT-ND3P03897 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MT-ND3P03897 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
MT-ND3P03897 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms