Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
MBD3O95983 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
MBD3O95983 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.84■■□□□ 1.09
MBD3O95983 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
MBD3O95983 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
MBD3O95983 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.84■■□□□ 1.09
MBD3O95983 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
MBD3O95983 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
MBD3O95983 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
MBD3O95983 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
MBD3O95983 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
MBD3O95983 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
MBD3O95983 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
MBD3O95983 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
MBD3O95983 CD276-203ENST00000537340 2439 ntTSL 2 BASIC21.84■■□□□ 1.09
MBD3O95983 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
MBD3O95983 AC126763.1-201ENST00000552015 2118 ntBASIC21.83■■□□□ 1.09
MBD3O95983 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC21.83■■□□□ 1.09
MBD3O95983 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
MBD3O95983 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
MBD3O95983 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC21.83■■□□□ 1.09
MBD3O95983 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC21.83■■□□□ 1.09
MBD3O95983 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC21.83■■□□□ 1.09
MBD3O95983 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC21.83■■□□□ 1.09
MBD3O95983 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.83■■□□□ 1.09
MBD3O95983 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
MBD3O95983 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.83■■□□□ 1.09
MBD3O95983 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.83■■□□□ 1.09
MBD3O95983 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.83■■□□□ 1.09
MBD3O95983 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC21.83■■□□□ 1.09
MBD3O95983 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
MBD3O95983 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
MBD3O95983 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.08
MBD3O95983 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC21.83■■□□□ 1.08
MBD3O95983 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
MBD3O95983 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
MBD3O95983 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
MBD3O95983 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
MBD3O95983 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
MBD3O95983 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
MBD3O95983 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
MBD3O95983 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
MBD3O95983 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
MBD3O95983 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
MBD3O95983 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC21.82■■□□□ 1.08
MBD3O95983 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
MBD3O95983 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC21.82■■□□□ 1.08
MBD3O95983 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
MBD3O95983 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.82■■□□□ 1.08
MBD3O95983 YBX1P10-201ENST00000444752 975 ntBASIC21.82■■□□□ 1.08
MBD3O95983 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.82■■□□□ 1.08
MBD3O95983 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
MBD3O95983 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
MBD3O95983 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.82■■□□□ 1.08
MBD3O95983 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
MBD3O95983 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC21.82■■□□□ 1.08
MBD3O95983 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
MBD3O95983 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
MBD3O95983 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
MBD3O95983 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC21.82■■□□□ 1.08
MBD3O95983 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
MBD3O95983 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC21.82■■□□□ 1.08
MBD3O95983 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
MBD3O95983 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
MBD3O95983 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
MBD3O95983 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
MBD3O95983 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
MBD3O95983 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
MBD3O95983 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
MBD3O95983 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC21.81■■□□□ 1.08
MBD3O95983 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
MBD3O95983 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
MBD3O95983 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC21.81■■□□□ 1.08
MBD3O95983 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
MBD3O95983 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.81■■□□□ 1.08
MBD3O95983 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
MBD3O95983 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.81■■□□□ 1.08
MBD3O95983 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.81■■□□□ 1.08
MBD3O95983 AC137761.2-201ENST00000561729 223 ntBASIC21.81■■□□□ 1.08
MBD3O95983 AC145350.3-201ENST00000569033 163 ntBASIC21.81■■□□□ 1.08
MBD3O95983 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.81■■□□□ 1.08
MBD3O95983 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
MBD3O95983 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
MBD3O95983 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
MBD3O95983 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
MBD3O95983 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC21.81■■□□□ 1.08
MBD3O95983 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
MBD3O95983 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
MBD3O95983 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
MBD3O95983 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
MBD3O95983 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
MBD3O95983 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
MBD3O95983 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
MBD3O95983 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
MBD3O95983 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
MBD3O95983 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
MBD3O95983 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
MBD3O95983 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
MBD3O95983 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
MBD3O95983 AL390719.1-204ENST00000412397 1219 ntBASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms