Protein–RNA interactions for Protein: O95447

LCA5L, Lebercilin-like protein, humanhuman

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5LO95447 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LCA5LO95447 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LCA5LO95447 HEIH-201ENST00000623091 1652 ntBASIC20.26■□□□□ 0.83
LCA5LO95447 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.25■□□□□ 0.83
LCA5LO95447 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.25■□□□□ 0.83
LCA5LO95447 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.25■□□□□ 0.83
LCA5LO95447 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LCA5LO95447 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
LCA5LO95447 AC005332.8-201ENST00000622750 2735 ntBASIC20.25■□□□□ 0.83
LCA5LO95447 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LCA5LO95447 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LCA5LO95447 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
LCA5LO95447 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.25■□□□□ 0.83
LCA5LO95447 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.25■□□□□ 0.83
LCA5LO95447 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.25■□□□□ 0.83
LCA5LO95447 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LCA5LO95447 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.25■□□□□ 0.83
LCA5LO95447 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.25■□□□□ 0.83
LCA5LO95447 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.25■□□□□ 0.83
LCA5LO95447 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.25■□□□□ 0.83
LCA5LO95447 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC20.25■□□□□ 0.83
LCA5LO95447 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
LCA5LO95447 KRT8P41-201ENST00000533985 1514 ntBASIC20.25■□□□□ 0.83
LCA5LO95447 AC068880.1-201ENST00000507289 2297 ntBASIC20.25■□□□□ 0.83
LCA5LO95447 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LCA5LO95447 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.25■□□□□ 0.83
LCA5LO95447 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.25■□□□□ 0.83
LCA5LO95447 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
LCA5LO95447 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LCA5LO95447 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
LCA5LO95447 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LCA5LO95447 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
LCA5LO95447 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LCA5LO95447 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
LCA5LO95447 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.24■□□□□ 0.83
LCA5LO95447 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC20.24■□□□□ 0.83
LCA5LO95447 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.24■□□□□ 0.83
LCA5LO95447 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LCA5LO95447 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LCA5LO95447 HLA-L-209ENST00000420110 1011 ntBASIC20.24■□□□□ 0.83
LCA5LO95447 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.24■□□□□ 0.83
LCA5LO95447 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LCA5LO95447 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LCA5LO95447 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.24■□□□□ 0.83
LCA5LO95447 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.24■□□□□ 0.83
LCA5LO95447 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.24■□□□□ 0.83
LCA5LO95447 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
LCA5LO95447 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.24■□□□□ 0.83
LCA5LO95447 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LCA5LO95447 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
LCA5LO95447 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
LCA5LO95447 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LCA5LO95447 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
LCA5LO95447 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LCA5LO95447 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC20.24■□□□□ 0.83
LCA5LO95447 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
LCA5LO95447 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
LCA5LO95447 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LCA5LO95447 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
LCA5LO95447 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
LCA5LO95447 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.23■□□□□ 0.83
LCA5LO95447 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.23■□□□□ 0.83
LCA5LO95447 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LCA5LO95447 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LCA5LO95447 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
LCA5LO95447 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LCA5LO95447 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.23■□□□□ 0.83
LCA5LO95447 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.23■□□□□ 0.83
LCA5LO95447 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.23■□□□□ 0.83
LCA5LO95447 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LCA5LO95447 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
LCA5LO95447 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.23■□□□□ 0.83
LCA5LO95447 UNC93B4-201ENST00000505679 747 ntBASIC20.23■□□□□ 0.83
LCA5LO95447 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.23■□□□□ 0.83
LCA5LO95447 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.23■□□□□ 0.83
LCA5LO95447 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.23■□□□□ 0.83
LCA5LO95447 AL138781.1-201ENST00000566567 1274 ntBASIC20.23■□□□□ 0.83
LCA5LO95447 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LCA5LO95447 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.23■□□□□ 0.83
LCA5LO95447 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LCA5LO95447 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LCA5LO95447 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LCA5LO95447 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.23■□□□□ 0.83
LCA5LO95447 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LCA5LO95447 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LCA5LO95447 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
LCA5LO95447 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LCA5LO95447 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.23■□□□□ 0.83
LCA5LO95447 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.22■□□□□ 0.83
LCA5LO95447 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LCA5LO95447 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC20.22■□□□□ 0.83
LCA5LO95447 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
LCA5LO95447 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
LCA5LO95447 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.22■□□□□ 0.83
LCA5LO95447 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LCA5LO95447 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LCA5LO95447 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LCA5LO95447 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LCA5LO95447 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.22■□□□□ 0.83
LCA5LO95447 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms