Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC14.82□□□□□ -0.04
ZNF253O75346 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC14.82□□□□□ -0.04
ZNF253O75346 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
ZNF253O75346 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF253O75346 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF253O75346 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF253O75346 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF253O75346 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF253O75346 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF253O75346 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF253O75346 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF253O75346 MOK-233ENST00000524214 1539 ntTSL 2 BASIC14.82□□□□□ -0.04
ZNF253O75346 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC14.81□□□□□ -0.04
ZNF253O75346 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZNF253O75346 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC14.81□□□□□ -0.04
ZNF253O75346 AC106820.2-201ENST00000563775 3264 ntBASIC14.81□□□□□ -0.04
ZNF253O75346 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZNF253O75346 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZNF253O75346 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZNF253O75346 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ZNF253O75346 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC14.81□□□□□ -0.04
ZNF253O75346 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
ZNF253O75346 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZNF253O75346 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZNF253O75346 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC14.81□□□□□ -0.04
ZNF253O75346 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZNF253O75346 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
ZNF253O75346 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZNF253O75346 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZNF253O75346 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ZNF253O75346 ISCU-212ENST00000547005 795 ntTSL 3 BASIC14.81□□□□□ -0.04
ZNF253O75346 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC14.81□□□□□ -0.04
ZNF253O75346 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
ZNF253O75346 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
ZNF253O75346 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZNF253O75346 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZNF253O75346 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZNF253O75346 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZNF253O75346 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZNF253O75346 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
ZNF253O75346 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZNF253O75346 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZNF253O75346 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
ZNF253O75346 KRT17P1-201ENST00000399211 1546 ntBASIC14.81□□□□□ -0.04
ZNF253O75346 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZNF253O75346 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF253O75346 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF253O75346 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
ZNF253O75346 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF253O75346 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF253O75346 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF253O75346 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF253O75346 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
ZNF253O75346 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF253O75346 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF253O75346 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC14.8□□□□□ -0.04
ZNF253O75346 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC14.8□□□□□ -0.04
ZNF253O75346 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF253O75346 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF253O75346 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF253O75346 ME3-201ENST00000323418 1068 ntTSL 5 BASIC14.8□□□□□ -0.04
ZNF253O75346 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC14.8□□□□□ -0.04
ZNF253O75346 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF253O75346 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC14.8□□□□□ -0.04
ZNF253O75346 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC14.8□□□□□ -0.04
ZNF253O75346 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC14.8□□□□□ -0.04
ZNF253O75346 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF253O75346 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF253O75346 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC14.8□□□□□ -0.04
ZNF253O75346 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF253O75346 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC14.8□□□□□ -0.04
ZNF253O75346 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC14.8□□□□□ -0.04
ZNF253O75346 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF253O75346 TFP1-202ENST00000475455 1573 ntBASIC14.8□□□□□ -0.04
ZNF253O75346 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF253O75346 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF253O75346 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF253O75346 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
ZNF253O75346 AC141586.3-201ENST00000562166 1838 ntBASIC14.8□□□□□ -0.04
ZNF253O75346 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF253O75346 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC14.8□□□□□ -0.04
ZNF253O75346 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC14.8□□□□□ -0.04
ZNF253O75346 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF253O75346 FER1L4-210ENST00000615531 5998 ntBASIC14.8□□□□□ -0.04
ZNF253O75346 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC14.8□□□□□ -0.04
ZNF253O75346 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC14.8□□□□□ -0.04
ZNF253O75346 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC14.8□□□□□ -0.04
ZNF253O75346 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF253O75346 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC14.8□□□□□ -0.04
ZNF253O75346 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
ZNF253O75346 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.79□□□□□ -0.04
ZNF253O75346 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF253O75346 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
ZNF253O75346 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF253O75346 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF253O75346 AC012313.1-201ENST00000593393 3059 ntBASIC14.79□□□□□ -0.04
ZNF253O75346 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF253O75346 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF253O75346 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF253O75346 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms