Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.33■□□□□ 0.69
PRAMEF11O60813 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PRAMEF11O60813 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PRAMEF11O60813 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PRAMEF11O60813 SLC25A1P2-201ENST00000430693 912 ntBASIC19.33■□□□□ 0.68
PRAMEF11O60813 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.33■□□□□ 0.68
PRAMEF11O60813 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PRAMEF11O60813 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.33■□□□□ 0.68
PRAMEF11O60813 NAPSB-206ENST00000562112 1266 ntBASIC19.33■□□□□ 0.68
PRAMEF11O60813 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.33■□□□□ 0.68
PRAMEF11O60813 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PRAMEF11O60813 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PRAMEF11O60813 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PRAMEF11O60813 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PRAMEF11O60813 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PRAMEF11O60813 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PRAMEF11O60813 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PRAMEF11O60813 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PRAMEF11O60813 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PRAMEF11O60813 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRAMEF11O60813 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PRAMEF11O60813 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PRAMEF11O60813 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PRAMEF11O60813 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.32■□□□□ 0.68
PRAMEF11O60813 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRAMEF11O60813 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRAMEF11O60813 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
PRAMEF11O60813 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.32■□□□□ 0.68
PRAMEF11O60813 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.32■□□□□ 0.68
PRAMEF11O60813 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PRAMEF11O60813 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.32■□□□□ 0.68
PRAMEF11O60813 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRAMEF11O60813 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRAMEF11O60813 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.32■□□□□ 0.68
PRAMEF11O60813 TSPY14P-201ENST00000303979 915 ntBASIC19.32■□□□□ 0.68
PRAMEF11O60813 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRAMEF11O60813 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.32■□□□□ 0.68
PRAMEF11O60813 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PRAMEF11O60813 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.32■□□□□ 0.68
PRAMEF11O60813 AL023803.3-201ENST00000615559 522 ntBASIC19.32■□□□□ 0.68
PRAMEF11O60813 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRAMEF11O60813 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRAMEF11O60813 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
PRAMEF11O60813 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRAMEF11O60813 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
PRAMEF11O60813 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRAMEF11O60813 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
PRAMEF11O60813 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.31■□□□□ 0.68
PRAMEF11O60813 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PRAMEF11O60813 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRAMEF11O60813 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PRAMEF11O60813 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.31■□□□□ 0.68
PRAMEF11O60813 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRAMEF11O60813 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
PRAMEF11O60813 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
PRAMEF11O60813 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRAMEF11O60813 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.31■□□□□ 0.68
PRAMEF11O60813 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PRAMEF11O60813 EGLN1P1-201ENST00000531623 762 ntBASIC19.31■□□□□ 0.68
PRAMEF11O60813 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.31■□□□□ 0.68
PRAMEF11O60813 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRAMEF11O60813 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRAMEF11O60813 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PRAMEF11O60813 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.31■□□□□ 0.68
PRAMEF11O60813 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRAMEF11O60813 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
PRAMEF11O60813 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PRAMEF11O60813 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRAMEF11O60813 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PRAMEF11O60813 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRAMEF11O60813 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PRAMEF11O60813 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.3■□□□□ 0.68
PRAMEF11O60813 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
PRAMEF11O60813 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRAMEF11O60813 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PRAMEF11O60813 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
PRAMEF11O60813 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
PRAMEF11O60813 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.3■□□□□ 0.68
PRAMEF11O60813 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PRAMEF11O60813 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.3■□□□□ 0.68
PRAMEF11O60813 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.3■□□□□ 0.68
PRAMEF11O60813 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PRAMEF11O60813 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PRAMEF11O60813 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
PRAMEF11O60813 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRAMEF11O60813 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRAMEF11O60813 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PRAMEF11O60813 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRAMEF11O60813 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRAMEF11O60813 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRAMEF11O60813 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
PRAMEF11O60813 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.29■□□□□ 0.68
PRAMEF11O60813 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRAMEF11O60813 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
PRAMEF11O60813 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRAMEF11O60813 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
PRAMEF11O60813 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PRAMEF11O60813 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
PRAMEF11O60813 CCR12P-201ENST00000446203 998 ntBASIC19.29■□□□□ 0.68
PRAMEF11O60813 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms