Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SMAD9O15198 SNORA78-201ENST00000459373 127 ntBASIC17.29■□□□□ 0.36
SMAD9O15198 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.29■□□□□ 0.36
SMAD9O15198 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.29■□□□□ 0.36
SMAD9O15198 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMAD9O15198 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SMAD9O15198 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.29■□□□□ 0.36
SMAD9O15198 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMAD9O15198 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SMAD9O15198 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SMAD9O15198 AC018445.3-201ENST00000624177 1945 ntBASIC17.29■□□□□ 0.36
SMAD9O15198 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMAD9O15198 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMAD9O15198 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMAD9O15198 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMAD9O15198 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SMAD9O15198 AC104417.2-201ENST00000562989 1793 ntBASIC17.28■□□□□ 0.36
SMAD9O15198 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SMAD9O15198 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMAD9O15198 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.28■□□□□ 0.36
SMAD9O15198 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SMAD9O15198 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.28■□□□□ 0.36
SMAD9O15198 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMAD9O15198 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMAD9O15198 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
SMAD9O15198 TSPY7P-201ENST00000431358 1114 ntBASIC17.28■□□□□ 0.36
SMAD9O15198 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.28■□□□□ 0.36
SMAD9O15198 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMAD9O15198 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMAD9O15198 AL160286.2-201ENST00000567150 934 ntBASIC17.28■□□□□ 0.36
SMAD9O15198 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SMAD9O15198 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.28■□□□□ 0.36
SMAD9O15198 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SMAD9O15198 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.28■□□□□ 0.36
SMAD9O15198 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMAD9O15198 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMAD9O15198 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.28■□□□□ 0.36
SMAD9O15198 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.28■□□□□ 0.36
SMAD9O15198 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMAD9O15198 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
SMAD9O15198 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMAD9O15198 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMAD9O15198 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMAD9O15198 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
SMAD9O15198 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMAD9O15198 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMAD9O15198 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMAD9O15198 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.27■□□□□ 0.36
SMAD9O15198 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMAD9O15198 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMAD9O15198 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMAD9O15198 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SMAD9O15198 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMAD9O15198 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMAD9O15198 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMAD9O15198 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.27■□□□□ 0.36
SMAD9O15198 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.27■□□□□ 0.36
SMAD9O15198 AC131212.4-201ENST00000623606 975 ntBASIC17.27■□□□□ 0.36
SMAD9O15198 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.27■□□□□ 0.36
SMAD9O15198 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.27■□□□□ 0.36
SMAD9O15198 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
SMAD9O15198 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SMAD9O15198 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.27■□□□□ 0.35
SMAD9O15198 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SMAD9O15198 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
SMAD9O15198 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.27■□□□□ 0.35
SMAD9O15198 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SMAD9O15198 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SMAD9O15198 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMAD9O15198 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SMAD9O15198 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMAD9O15198 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.26■□□□□ 0.35
SMAD9O15198 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMAD9O15198 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.26■□□□□ 0.35
SMAD9O15198 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.26■□□□□ 0.35
SMAD9O15198 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMAD9O15198 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
SMAD9O15198 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMAD9O15198 AL596275.1-201ENST00000423464 877 ntBASIC17.26■□□□□ 0.35
SMAD9O15198 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.26■□□□□ 0.35
SMAD9O15198 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMAD9O15198 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SMAD9O15198 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.26■□□□□ 0.35
SMAD9O15198 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.26■□□□□ 0.35
SMAD9O15198 AC026271.3-201ENST00000571884 352 ntBASIC17.26■□□□□ 0.35
SMAD9O15198 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.26■□□□□ 0.35
SMAD9O15198 MIR4497-201ENST00000583208 89 ntBASIC17.26■□□□□ 0.35
SMAD9O15198 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.26■□□□□ 0.35
SMAD9O15198 AL031985.4-201ENST00000642138 673 ntBASIC17.26■□□□□ 0.35
SMAD9O15198 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
SMAD9O15198 Z82202.1-201ENST00000623446 1880 ntBASIC17.26■□□□□ 0.35
SMAD9O15198 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMAD9O15198 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
SMAD9O15198 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SMAD9O15198 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMAD9O15198 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.26■□□□□ 0.35
SMAD9O15198 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMAD9O15198 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMAD9O15198 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMAD9O15198 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms