Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 AL445675.2-201ENST00000620291 557 ntBASIC18.69■□□□□ 0.58
CDC7O00311 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDC7O00311 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDC7O00311 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDC7O00311 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDC7O00311 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDC7O00311 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDC7O00311 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDC7O00311 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDC7O00311 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDC7O00311 AL031598.1-201ENST00000561511 1773 ntBASIC18.68■□□□□ 0.58
CDC7O00311 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CDC7O00311 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDC7O00311 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDC7O00311 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDC7O00311 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.68■□□□□ 0.58
CDC7O00311 FAM201B-201ENST00000458407 597 ntBASIC18.68■□□□□ 0.58
CDC7O00311 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.68■□□□□ 0.58
CDC7O00311 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.68■□□□□ 0.58
CDC7O00311 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDC7O00311 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.68■□□□□ 0.58
CDC7O00311 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CDC7O00311 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.68■□□□□ 0.58
CDC7O00311 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDC7O00311 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDC7O00311 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CDC7O00311 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDC7O00311 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDC7O00311 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDC7O00311 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.68■□□□□ 0.58
CDC7O00311 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CDC7O00311 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDC7O00311 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDC7O00311 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDC7O00311 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDC7O00311 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDC7O00311 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.67■□□□□ 0.58
CDC7O00311 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDC7O00311 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
CDC7O00311 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDC7O00311 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.67■□□□□ 0.58
CDC7O00311 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.67■□□□□ 0.58
CDC7O00311 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDC7O00311 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDC7O00311 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDC7O00311 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDC7O00311 AC004980.1-204ENST00000429707 299 ntBASIC18.67■□□□□ 0.58
CDC7O00311 AP002982.1-201ENST00000492365 877 ntBASIC18.67■□□□□ 0.58
CDC7O00311 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.67■□□□□ 0.58
CDC7O00311 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDC7O00311 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDC7O00311 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDC7O00311 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDC7O00311 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.67■□□□□ 0.58
CDC7O00311 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDC7O00311 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CDC7O00311 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDC7O00311 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDC7O00311 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDC7O00311 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.66■□□□□ 0.58
CDC7O00311 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDC7O00311 AL512353.2-201ENST00000448759 1962 ntBASIC18.66■□□□□ 0.58
CDC7O00311 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDC7O00311 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.66■□□□□ 0.58
CDC7O00311 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDC7O00311 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.66■□□□□ 0.58
CDC7O00311 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDC7O00311 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDC7O00311 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CDC7O00311 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDC7O00311 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDC7O00311 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDC7O00311 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CDC7O00311 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDC7O00311 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDC7O00311 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.66■□□□□ 0.58
CDC7O00311 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.66■□□□□ 0.58
CDC7O00311 AL359736.2-201ENST00000621992 437 ntBASIC18.66■□□□□ 0.58
CDC7O00311 AC131212.4-201ENST00000623606 975 ntBASIC18.66■□□□□ 0.58
CDC7O00311 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.66■□□□□ 0.58
CDC7O00311 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDC7O00311 AC093525.10-201ENST00000625130 1569 ntBASIC18.66■□□□□ 0.58
CDC7O00311 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDC7O00311 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDC7O00311 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.66■□□□□ 0.58
CDC7O00311 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.66■□□□□ 0.58
CDC7O00311 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.66■□□□□ 0.58
CDC7O00311 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDC7O00311 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.66■□□□□ 0.58
CDC7O00311 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.66■□□□□ 0.58
CDC7O00311 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.66■□□□□ 0.58
CDC7O00311 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.65■□□□□ 0.58
CDC7O00311 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDC7O00311 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDC7O00311 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CDC7O00311 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDC7O00311 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDC7O00311 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.65■□□□□ 0.58
CDC7O00311 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDC7O00311 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms