Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TAF4O00268 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TAF4O00268 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.63■□□□□ 0.57
TAF4O00268 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TAF4O00268 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TAF4O00268 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
TAF4O00268 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TAF4O00268 AC006128.1-201ENST00000624704 1661 ntBASIC18.63■□□□□ 0.57
TAF4O00268 LETM1P2-201ENST00000597330 2178 ntBASIC18.62■□□□□ 0.57
TAF4O00268 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.62■□□□□ 0.57
TAF4O00268 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TAF4O00268 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TAF4O00268 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.62■□□□□ 0.57
TAF4O00268 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TAF4O00268 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.62■□□□□ 0.57
TAF4O00268 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TAF4O00268 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TAF4O00268 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TAF4O00268 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.62■□□□□ 0.57
TAF4O00268 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TAF4O00268 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.62■□□□□ 0.57
TAF4O00268 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TAF4O00268 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.62■□□□□ 0.57
TAF4O00268 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TAF4O00268 KRT8P10-201ENST00000450021 1447 ntBASIC18.62■□□□□ 0.57
TAF4O00268 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TAF4O00268 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.62■□□□□ 0.57
TAF4O00268 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.62■□□□□ 0.57
TAF4O00268 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TAF4O00268 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TAF4O00268 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TAF4O00268 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TAF4O00268 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TAF4O00268 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TAF4O00268 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TAF4O00268 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.62■□□□□ 0.57
TAF4O00268 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TAF4O00268 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TAF4O00268 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TAF4O00268 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TAF4O00268 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
TAF4O00268 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TAF4O00268 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TAF4O00268 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TAF4O00268 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
TAF4O00268 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TAF4O00268 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.61■□□□□ 0.57
TAF4O00268 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TAF4O00268 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TAF4O00268 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
TAF4O00268 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.61■□□□□ 0.57
TAF4O00268 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.61■□□□□ 0.57
TAF4O00268 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TAF4O00268 ATP5G2P1-201ENST00000433580 426 ntBASIC18.61■□□□□ 0.57
TAF4O00268 AC007663.1-201ENST00000438948 1240 ntBASIC18.61■□□□□ 0.57
TAF4O00268 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TAF4O00268 KRT18P38-201ENST00000449496 1282 ntBASIC18.61■□□□□ 0.57
TAF4O00268 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TAF4O00268 PRSS44-201ENST00000515154 1146 ntBASIC18.61■□□□□ 0.57
TAF4O00268 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.61■□□□□ 0.57
TAF4O00268 AL136038.3-201ENST00000561909 1096 ntBASIC18.61■□□□□ 0.57
TAF4O00268 AL441883.1-201ENST00000566170 1045 ntBASIC18.61■□□□□ 0.57
TAF4O00268 C1QL1P1-201ENST00000568105 661 ntBASIC18.61■□□□□ 0.57
TAF4O00268 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TAF4O00268 AP000692.2-201ENST00000608391 879 ntBASIC18.61■□□□□ 0.57
TAF4O00268 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TAF4O00268 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TAF4O00268 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TAF4O00268 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TAF4O00268 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TAF4O00268 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
TAF4O00268 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TAF4O00268 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TAF4O00268 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.61■□□□□ 0.57
TAF4O00268 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.61■□□□□ 0.57
TAF4O00268 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TAF4O00268 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TAF4O00268 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TAF4O00268 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TAF4O00268 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.6■□□□□ 0.57
TAF4O00268 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TAF4O00268 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TAF4O00268 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TAF4O00268 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.6■□□□□ 0.57
TAF4O00268 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TAF4O00268 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
TAF4O00268 KRT17P6-201ENST00000453795 1220 ntBASIC18.6■□□□□ 0.57
TAF4O00268 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.6■□□□□ 0.57
TAF4O00268 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.6■□□□□ 0.57
TAF4O00268 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.6■□□□□ 0.57
TAF4O00268 AC010653.2-201ENST00000623505 997 ntBASIC18.6■□□□□ 0.57
TAF4O00268 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.6■□□□□ 0.57
TAF4O00268 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
TAF4O00268 AL031432.5-201ENST00000641059 760 ntBASIC18.6■□□□□ 0.57
TAF4O00268 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
TAF4O00268 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.6■□□□□ 0.57
TAF4O00268 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TAF4O00268 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TAF4O00268 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.6■□□□□ 0.57
TAF4O00268 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms