Protein–RNA interactions for Protein: A1L190

SYCE3, Synaptonemal complex central element protein 3, humanhuman

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE3A1L190 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
SYCE3A1L190 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SYCE3A1L190 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.68■■□□□ 1.06
SYCE3A1L190 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.68■■□□□ 1.06
SYCE3A1L190 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SYCE3A1L190 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SYCE3A1L190 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.68■■□□□ 1.06
SYCE3A1L190 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SYCE3A1L190 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC21.68■■□□□ 1.06
SYCE3A1L190 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
SYCE3A1L190 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SYCE3A1L190 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SYCE3A1L190 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
SYCE3A1L190 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC21.68■■□□□ 1.06
SYCE3A1L190 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC21.67■■□□□ 1.06
SYCE3A1L190 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SYCE3A1L190 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC21.67■■□□□ 1.06
SYCE3A1L190 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SYCE3A1L190 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SYCE3A1L190 AC073592.3-201ENST00000625118 1834 ntBASIC21.67■■□□□ 1.06
SYCE3A1L190 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
SYCE3A1L190 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SYCE3A1L190 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.67■■□□□ 1.06
SYCE3A1L190 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
SYCE3A1L190 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SYCE3A1L190 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
SYCE3A1L190 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SYCE3A1L190 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SYCE3A1L190 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.67■■□□□ 1.06
SYCE3A1L190 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SYCE3A1L190 CYP2T1P-201ENST00000432607 1285 ntBASIC21.67■■□□□ 1.06
SYCE3A1L190 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.67■■□□□ 1.06
SYCE3A1L190 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.67■■□□□ 1.06
SYCE3A1L190 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SYCE3A1L190 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SYCE3A1L190 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SYCE3A1L190 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SYCE3A1L190 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SYCE3A1L190 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SYCE3A1L190 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SYCE3A1L190 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SYCE3A1L190 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.66■■□□□ 1.06
SYCE3A1L190 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC21.66■■□□□ 1.06
SYCE3A1L190 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SYCE3A1L190 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.66■■□□□ 1.06
SYCE3A1L190 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SYCE3A1L190 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SYCE3A1L190 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SYCE3A1L190 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
SYCE3A1L190 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SYCE3A1L190 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SYCE3A1L190 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC21.66■■□□□ 1.06
SYCE3A1L190 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.65■■□□□ 1.06
SYCE3A1L190 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SYCE3A1L190 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SYCE3A1L190 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SYCE3A1L190 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SYCE3A1L190 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SYCE3A1L190 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
SYCE3A1L190 GATB-213ENST00000515812 1893 ntTSL 5 BASIC21.65■■□□□ 1.06
SYCE3A1L190 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SYCE3A1L190 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
SYCE3A1L190 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
SYCE3A1L190 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SYCE3A1L190 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC21.65■■□□□ 1.06
SYCE3A1L190 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.65■■□□□ 1.06
SYCE3A1L190 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.65■■□□□ 1.06
SYCE3A1L190 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.65■■□□□ 1.06
SYCE3A1L190 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.65■■□□□ 1.06
SYCE3A1L190 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.65■■□□□ 1.06
SYCE3A1L190 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SYCE3A1L190 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
SYCE3A1L190 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SYCE3A1L190 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SYCE3A1L190 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SYCE3A1L190 ESPNP-201ENST00000270691 2015 ntBASIC21.65■■□□□ 1.06
SYCE3A1L190 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC21.65■■□□□ 1.06
SYCE3A1L190 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SYCE3A1L190 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
SYCE3A1L190 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
SYCE3A1L190 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
SYCE3A1L190 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21.64■■□□□ 1.06
SYCE3A1L190 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
SYCE3A1L190 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
SYCE3A1L190 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
SYCE3A1L190 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SYCE3A1L190 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
SYCE3A1L190 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SYCE3A1L190 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SYCE3A1L190 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC21.64■■□□□ 1.05
SYCE3A1L190 DUX4L16-201ENST00000555130 1264 ntBASIC21.64■■□□□ 1.05
SYCE3A1L190 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.64■■□□□ 1.05
SYCE3A1L190 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC21.64■■□□□ 1.05
SYCE3A1L190 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SYCE3A1L190 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SYCE3A1L190 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
SYCE3A1L190 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SYCE3A1L190 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC21.64■■□□□ 1.05
SYCE3A1L190 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SYCE3A1L190 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms