Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-1A0A0K0K1D8 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC14.24□□□□□ -0.13
TRBV6-1A0A0K0K1D8 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-1A0A0K0K1D8 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-1A0A0K0K1D8 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC14.24□□□□□ -0.13
TRBV6-1A0A0K0K1D8 AC007322.1-201ENST00000426983 750 ntBASIC14.24□□□□□ -0.13
TRBV6-1A0A0K0K1D8 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TRBV6-1A0A0K0K1D8 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-1A0A0K0K1D8 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-1A0A0K0K1D8 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC14.24□□□□□ -0.13
TRBV6-1A0A0K0K1D8 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-1A0A0K0K1D8 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC14.24□□□□□ -0.13
TRBV6-1A0A0K0K1D8 MYC-208ENST00000641036 567 ntBASIC14.24□□□□□ -0.13
TRBV6-1A0A0K0K1D8 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-1A0A0K0K1D8 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC14.24□□□□□ -0.13
TRBV6-1A0A0K0K1D8 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC14.24□□□□□ -0.13
TRBV6-1A0A0K0K1D8 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC14.24□□□□□ -0.13
TRBV6-1A0A0K0K1D8 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC14.24□□□□□ -0.13
TRBV6-1A0A0K0K1D8 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-1A0A0K0K1D8 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-1A0A0K0K1D8 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-1A0A0K0K1D8 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-1A0A0K0K1D8 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-1A0A0K0K1D8 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-1A0A0K0K1D8 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC14.24□□□□□ -0.13
TRBV6-1A0A0K0K1D8 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-1A0A0K0K1D8 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV6-1A0A0K0K1D8 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV6-1A0A0K0K1D8 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
TRBV6-1A0A0K0K1D8 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
TRBV6-1A0A0K0K1D8 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV6-1A0A0K0K1D8 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV6-1A0A0K0K1D8 TUBB8P6-201ENST00000436895 1288 ntBASIC14.23□□□□□ -0.13
TRBV6-1A0A0K0K1D8 RPS2P52-201ENST00000469610 820 ntBASIC14.23□□□□□ -0.13
TRBV6-1A0A0K0K1D8 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC14.23□□□□□ -0.13
TRBV6-1A0A0K0K1D8 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC14.23□□□□□ -0.13
TRBV6-1A0A0K0K1D8 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV6-1A0A0K0K1D8 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV6-1A0A0K0K1D8 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV6-1A0A0K0K1D8 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC14.23□□□□□ -0.13
TRBV6-1A0A0K0K1D8 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV6-1A0A0K0K1D8 AC011767.1-201ENST00000617410 1153 ntBASIC14.23□□□□□ -0.13
TRBV6-1A0A0K0K1D8 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC14.23□□□□□ -0.13
TRBV6-1A0A0K0K1D8 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC14.23□□□□□ -0.13
TRBV6-1A0A0K0K1D8 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC14.23□□□□□ -0.13
TRBV6-1A0A0K0K1D8 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV6-1A0A0K0K1D8 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC14.23□□□□□ -0.13
TRBV6-1A0A0K0K1D8 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV6-1A0A0K0K1D8 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV6-1A0A0K0K1D8 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV6-1A0A0K0K1D8 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TRBV6-1A0A0K0K1D8 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV6-1A0A0K0K1D8 HEIH-201ENST00000623091 1652 ntBASIC14.23□□□□□ -0.13
TRBV6-1A0A0K0K1D8 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
TRBV6-1A0A0K0K1D8 LTB4R2-202ENST00000528054 3092 ntBASIC14.23□□□□□ -0.13
TRBV6-1A0A0K0K1D8 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV6-1A0A0K0K1D8 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV6-1A0A0K0K1D8 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
TRBV6-1A0A0K0K1D8 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV6-1A0A0K0K1D8 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV6-1A0A0K0K1D8 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV6-1A0A0K0K1D8 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC14.22□□□□□ -0.13
TRBV6-1A0A0K0K1D8 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV6-1A0A0K0K1D8 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
TRBV6-1A0A0K0K1D8 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV6-1A0A0K0K1D8 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
TRBV6-1A0A0K0K1D8 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC14.22□□□□□ -0.13
TRBV6-1A0A0K0K1D8 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC14.22□□□□□ -0.13
TRBV6-1A0A0K0K1D8 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV6-1A0A0K0K1D8 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV6-1A0A0K0K1D8 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC14.22□□□□□ -0.13
TRBV6-1A0A0K0K1D8 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV6-1A0A0K0K1D8 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV6-1A0A0K0K1D8 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV6-1A0A0K0K1D8 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV6-1A0A0K0K1D8 AC093787.1-201ENST00000450396 207 ntBASIC14.22□□□□□ -0.13
TRBV6-1A0A0K0K1D8 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV6-1A0A0K0K1D8 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC14.22□□□□□ -0.13
TRBV6-1A0A0K0K1D8 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC14.22□□□□□ -0.13
TRBV6-1A0A0K0K1D8 AC005181.1-201ENST00000604782 1256 ntBASIC14.22□□□□□ -0.13
TRBV6-1A0A0K0K1D8 AC067852.2-201ENST00000590513 2313 ntBASIC14.22□□□□□ -0.13
TRBV6-1A0A0K0K1D8 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV6-1A0A0K0K1D8 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC14.22□□□□□ -0.13
TRBV6-1A0A0K0K1D8 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV6-1A0A0K0K1D8 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV6-1A0A0K0K1D8 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV6-1A0A0K0K1D8 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC14.22□□□□□ -0.13
TRBV6-1A0A0K0K1D8 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC14.22□□□□□ -0.13
TRBV6-1A0A0K0K1D8 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV6-1A0A0K0K1D8 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV6-1A0A0K0K1D8 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV6-1A0A0K0K1D8 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
TRBV6-1A0A0K0K1D8 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV6-1A0A0K0K1D8 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC14.22□□□□□ -0.13
TRBV6-1A0A0K0K1D8 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC14.22□□□□□ -0.13
TRBV6-1A0A0K0K1D8 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
TRBV6-1A0A0K0K1D8 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRBV6-1A0A0K0K1D8 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
TRBV6-1A0A0K0K1D8 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRBV6-1A0A0K0K1D8 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms