Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC14.49□□□□□ -0.09
TRAV8-1A0A0A6YYK1 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
TRAV8-1A0A0A6YYK1 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV8-1A0A0A6YYK1 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV8-1A0A0A6YYK1 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
TRAV8-1A0A0A6YYK1 PXK-206ENST00000463280 2825 ntTSL 2 BASIC14.49□□□□□ -0.09
TRAV8-1A0A0A6YYK1 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV8-1A0A0A6YYK1 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC14.49□□□□□ -0.09
TRAV8-1A0A0A6YYK1 NOC2LP1-202ENST00000452600 2235 ntBASIC14.49□□□□□ -0.09
TRAV8-1A0A0A6YYK1 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
TRAV8-1A0A0A6YYK1 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC14.49□□□□□ -0.09
TRAV8-1A0A0A6YYK1 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV8-1A0A0A6YYK1 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV8-1A0A0A6YYK1 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV8-1A0A0A6YYK1 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV8-1A0A0A6YYK1 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
TRAV8-1A0A0A6YYK1 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV8-1A0A0A6YYK1 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV8-1A0A0A6YYK1 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV8-1A0A0A6YYK1 ANKRD18DP-204ENST00000455355 1975 ntBASIC14.48□□□□□ -0.09
TRAV8-1A0A0A6YYK1 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TRAV8-1A0A0A6YYK1 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV8-1A0A0A6YYK1 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV8-1A0A0A6YYK1 KRT18P5-201ENST00000436075 1291 ntBASIC14.48□□□□□ -0.09
TRAV8-1A0A0A6YYK1 ISCU-212ENST00000547005 795 ntTSL 3 BASIC14.48□□□□□ -0.09
TRAV8-1A0A0A6YYK1 AC231657.2-201ENST00000624556 255 ntBASIC14.48□□□□□ -0.09
TRAV8-1A0A0A6YYK1 PARP1-210ENST00000629232 477 ntTSL 5 BASIC14.48□□□□□ -0.09
TRAV8-1A0A0A6YYK1 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
TRAV8-1A0A0A6YYK1 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV8-1A0A0A6YYK1 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV8-1A0A0A6YYK1 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV8-1A0A0A6YYK1 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
TRAV8-1A0A0A6YYK1 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TRAV8-1A0A0A6YYK1 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TRAV8-1A0A0A6YYK1 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
TRAV8-1A0A0A6YYK1 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV8-1A0A0A6YYK1 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV8-1A0A0A6YYK1 AC124283.5-201ENST00000624661 1809 ntBASIC14.48□□□□□ -0.09
TRAV8-1A0A0A6YYK1 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV8-1A0A0A6YYK1 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC14.47□□□□□ -0.09
TRAV8-1A0A0A6YYK1 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC14.47□□□□□ -0.09
TRAV8-1A0A0A6YYK1 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC14.47□□□□□ -0.09
TRAV8-1A0A0A6YYK1 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TRAV8-1A0A0A6YYK1 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV8-1A0A0A6YYK1 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV8-1A0A0A6YYK1 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV8-1A0A0A6YYK1 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV8-1A0A0A6YYK1 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV8-1A0A0A6YYK1 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC14.47□□□□□ -0.09
TRAV8-1A0A0A6YYK1 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
TRAV8-1A0A0A6YYK1 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC14.47□□□□□ -0.09
TRAV8-1A0A0A6YYK1 CD276-201ENST00000318424 2738 ntTSL 5 BASIC14.47□□□□□ -0.09
TRAV8-1A0A0A6YYK1 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV8-1A0A0A6YYK1 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV8-1A0A0A6YYK1 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC14.47□□□□□ -0.09
TRAV8-1A0A0A6YYK1 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV8-1A0A0A6YYK1 AC068880.1-201ENST00000507289 2297 ntBASIC14.47□□□□□ -0.09
TRAV8-1A0A0A6YYK1 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC14.47□□□□□ -0.09
TRAV8-1A0A0A6YYK1 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV8-1A0A0A6YYK1 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV8-1A0A0A6YYK1 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV8-1A0A0A6YYK1 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC14.47□□□□□ -0.09
TRAV8-1A0A0A6YYK1 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV8-1A0A0A6YYK1 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV8-1A0A0A6YYK1 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV8-1A0A0A6YYK1 AC006015.1-201ENST00000429970 570 ntBASIC14.47□□□□□ -0.09
TRAV8-1A0A0A6YYK1 HES2-206ENST00000489730 730 ntTSL 2 BASIC14.47□□□□□ -0.09
TRAV8-1A0A0A6YYK1 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC14.47□□□□□ -0.09
TRAV8-1A0A0A6YYK1 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC14.47□□□□□ -0.09
TRAV8-1A0A0A6YYK1 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC14.47□□□□□ -0.09
TRAV8-1A0A0A6YYK1 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC14.47□□□□□ -0.09
TRAV8-1A0A0A6YYK1 MAZ-216ENST00000616501 991 ntTSL 5 BASIC14.47□□□□□ -0.09
TRAV8-1A0A0A6YYK1 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV8-1A0A0A6YYK1 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
TRAV8-1A0A0A6YYK1 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV8-1A0A0A6YYK1 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV8-1A0A0A6YYK1 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV8-1A0A0A6YYK1 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC14.47□□□□□ -0.09
TRAV8-1A0A0A6YYK1 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV8-1A0A0A6YYK1 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV8-1A0A0A6YYK1 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV8-1A0A0A6YYK1 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV8-1A0A0A6YYK1 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC14.46□□□□□ -0.09
TRAV8-1A0A0A6YYK1 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
TRAV8-1A0A0A6YYK1 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV8-1A0A0A6YYK1 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV8-1A0A0A6YYK1 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV8-1A0A0A6YYK1 UBQLN4P1-201ENST00000461599 1801 ntBASIC14.46□□□□□ -0.09
TRAV8-1A0A0A6YYK1 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV8-1A0A0A6YYK1 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV8-1A0A0A6YYK1 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC14.46□□□□□ -0.09
TRAV8-1A0A0A6YYK1 WAC-202ENST00000347934 2839 ntTSL 5 BASIC14.46□□□□□ -0.09
TRAV8-1A0A0A6YYK1 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
TRAV8-1A0A0A6YYK1 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV8-1A0A0A6YYK1 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV8-1A0A0A6YYK1 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV8-1A0A0A6YYK1 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC14.46□□□□□ -0.09
TRAV8-1A0A0A6YYK1 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC14.46□□□□□ -0.09
TRAV8-1A0A0A6YYK1 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV8-1A0A0A6YYK1 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms